STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ95458.1This conserved protein contains five type-III fibronectin (FN3) domains. Structures of individual FN3 domains have revealed a conserved beta sandwich fold with one beta sheet containing four strands and the other sheet containing three strands; Localized in the cytoplasm; Family membership. (653 aa)    
Predicted Functional Partners:
CAZ95459.1
Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.946
CAZ95457.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 25 and 26; Localized in the periplasmic space; Conserved hypothetical protein.
 
    0.906
CAZ95455.1
Hypothetical protein. Putatively localized in the cytoplasm.
 
    0.860
CAZ95454.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
     0.838
CAZ97865.1
Conserved hypothetical protein; Signal peptide cleaved between the residues 27 and 28; Putatively localized in the outer membrane (PSORT result).
  
     0.709
CAZ94993.1
TPR repeats protein; Conserved protein containing three N-terminal tetratrico peptide repeats (TPRs) and a C-terminal conserved domain of unknown function. TPR repeats mediate proteinprotein interactions and the assembly of multiprotein complexes; Contains a C-terminal transmembrane helix; Localized in the cytoplasmic membrane; Function unclear.
 
    0.636
CAZ97042.1
Conserved hypothetical protein; Contains several Single hybrid motifs found in biotinyl/lipoyl-carrier proteins and domains, where the biotin and lipoic acid moieties act as covalently attached coenzyme in various enzymes; Signal peptide cleaved between the residues 23 and 24; Putatively localized in the cytoplasmic membrane.
  
     0.578
CAZ94705.1
Conserved hypothetical protein; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space.
  
     0.573
CAZ96636.1
Conserved hypothetical protein; Signal peptide cleaved between the residues 28 and 29; Possibly localized in the outer membrane.
  
     0.532
CAZ94992.1
Serine peptidase, family S8; Serine peptidase contains a catalytic triad in the order Asp, His and Ser in the sequence. Its structure consists of three layers with a seven-stranded beta sheet sandwiched between two layers of helices; Belongs to the family S8 of peptidases; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 17 and 18; Localized in the cytoplasmic membrane; Specificity unclear.
  
     0.508
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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