STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94215.1Hypothetical membrane protein; Contains a PspC domain that is thought to be a stress-responsive transcriptional regulator, and four transmembrane segments; Probably localized in the cytoplasmic membrane; Hypothetical protein. (613 aa)    
Predicted Functional Partners:
CAZ94214.1
Transcriptional regulator belonging to the PadR family. Features a helix-turn-helix DNA binding motif. Localized in the cytoplasm; Specificity unclear.
     0.844
CAZ96601.1
Conserved membrane protein belonging to the DUF360 family. Contains four transmembrane helices; Localized in the cytoplasmic membrane.
  
  
 0.800
CAZ94216.1
Putative membrane lipoprotein; Signal peptide cleaved between the residues 19 and 20; localized in the outer or cytoplasmic membrane or both; Hypothetical protein.
 
  
 0.755
CAZ94212.1
Conserved Hypothetical membrane protein; Contains three transmembrane segments; Probably localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
    0.738
CAZ98193.1
Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.630
CAZ96913.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.611
CAZ95806.1
Conserved hypothetical membrane protein; Contains one transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.574
CAZ94779.1
The sensor histidine kinase belongs to two-component signal transduction systems. The cytoplasmic part of the protein consists of the histidine kinase domain and of the receiver domain of the response regulator that is phosphorylated by the histidine kinase domain. A transmembrane segment separates this part from the periplasmic part that contains three tetratrico peptide repeats; Localized in the cytoplasmic membrane; Family membership.
  
 
 0.554
CAZ97588.1
Beta-helix fold protein; Protein that likely adopts a right handed parallel beta-helix fold; Contains a C-terminal PDZ domain responsible of protein-protein interaction by binding either the carboxyl-terminal sequences of proteins or internal peptide sequences suggesting that it could be a signaling protein; Prokaryotic lipoprotein signal peptide cleaved between 19 and 20; Localized in the outer membrane; Conserved hypothetical protein.
  
  
 0.541
degP
Peptidase Do, family S1; Peptidase Do is a heat shock protein which is required for bacterial growth at elevated temperatures. It is involved in the degradation of damaged proteins. Belongs to the family 1 of the serine peptidase. Displays a catalytic triad His, Asp and Ser. Contains a C-terminal PDZ domain. Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; High confidence in function and specificity.
  
  
 0.541
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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