STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ95491.1Conserved protein belonging to the DUF1080 family; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasm; Conserved hypothetical protein. (216 aa)    
Predicted Functional Partners:
CAZ96723.1
Conserved hypothetical membrane protein; Protein consisting of a domain of unknown function DUF1080; Contains a putative lipoprotein signal peptide cleaved between the residues 16 and 17; Possibly localized in the outer membrane; Conserved hypothetical protein.
     0.977
CAZ96445.1
Conserved hypothetical membrane protein; Protein consisting to a domain of unknown function DUF1080; Contains a putative lipoprotein signal peptide cleaved between the residues 16 and 17; Possibly localized in the outer membrane; Conserved hypothetical protein.
    
0.932
CAZ95977.1
Conserved hypothetical membrane protein; Contains a domain of unknown function (DUF1080) that may adopt a concavalin-like or glucanase-like fold founded in glycoside hydrolases; Putative lipoprotein signal peptide cleaved between the residues 16 and 17; Possibly localized in the outer membrane; Conserved hypothetical protein.
    
0.927
CAZ95737.1
Conserved hypothetical lipoprotein; Contains a domain of unknown function (DUF1080) that may adopt a concavalin-like or glucanase-like fold; Prokaryotic lipoprotein signal peptide cleaved between the residues 17 and 18; Localized in the outer membrane; Conserved hypothetical protein.
 
     0.808
CAZ95492.1
Conserved hypothetical membrane protein; Contains four transmembrane segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
       0.776
siaHI
Exo-alpha-sialidase catalyzes the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)- glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates. Features a twin-arginine signal peptide. Localized in the periplasm; High confidence in function and specificity.
  
     0.756
CAZ98850.1
NAD(P)-dependent dehydrogenase; Belongs to the Rossmann fold family; Contains a twin-arginine translocation signal peptide; Localized in the periplasmic space; Specificity unclear.
  
     0.749
CAZ96724.1
NAD(P)-dependent dehydrogenase that adoptd a Rossmann fold; Belongs to the GFO/IDH/MOCA family; Contains a twin-arginine translocation signal peptide cleaved between the residues 25 and 26; Localized in the periplasmic space; Specificity unclear.
  
     0.703
CAZ95934.1
NAD(P)-dependent dehydrogenase, exported; NAD(P)-dependent dehydrogenase. Belongs to the Rossmann fold family. Features a twin-arginine translocation signal peptide; Specificity unclear.
  
     0.689
CAZ96993.1
NAD(P)-dependent dehydrogenase, exported; NAD(P)-dependent dehydrogenase. Belongs to the Rossmann fold family. Features a twin-arginine translocation signal peptide; Function unclear.
  
     0.682
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.