Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ94267.1 | CAZ95520.1 | ZOBELLIA_194 | ZOBELLIA_1464 | Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the outer membrane; Conserved hypothetical protein. | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | 0.928 |
| CAZ94977.1 | CAZ95520.1 | ZOBELLIA_914 | ZOBELLIA_1464 | SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 20 and 21; Probably localized in the outer membrane; Family membership. | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | 0.511 |
| CAZ94977.1 | rhaA | ZOBELLIA_914 | ZOBELLIA_3522 | SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 20 and 21; Probably localized in the outer membrane; Family membership. | Alpha-L-rhamnosidase, family GH78; Alpha-L-rhamnosidase catalyzes the hydrolysis of terminal non-reducing alpha-L-rhamnose residues in alpha-L-rhamnosides. It belongs to the family 78 of the glycoside hydrolases. Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; High confidence in function and specificity. | 0.408 |
| CAZ95518.1 | CAZ95519.1 | ZOBELLIA_1462 | ZOBELLIA_1463 | The alpha/beta hydrolase-fold proteins catalyse a wide range of enzymatic reactions. They are characterized by a catalytic triad, usually an serine, an aspartic acid, and an histidine; The core of enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices; Belongs to alpha/beta hydrolase superfamily; Localized in the cytoplasm; Function unclear. | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys85 and Cys88. His89 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the cytoplasmic and/or outer membrane; Funct [...] | 0.568 |
| CAZ95518.1 | CAZ95520.1 | ZOBELLIA_1462 | ZOBELLIA_1464 | The alpha/beta hydrolase-fold proteins catalyse a wide range of enzymatic reactions. They are characterized by a catalytic triad, usually an serine, an aspartic acid, and an histidine; The core of enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices; Belongs to alpha/beta hydrolase superfamily; Localized in the cytoplasm; Function unclear. | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | 0.434 |
| CAZ95519.1 | CAZ95518.1 | ZOBELLIA_1463 | ZOBELLIA_1462 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys85 and Cys88. His89 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the cytoplasmic and/or outer membrane; Funct [...] | The alpha/beta hydrolase-fold proteins catalyse a wide range of enzymatic reactions. They are characterized by a catalytic triad, usually an serine, an aspartic acid, and an histidine; The core of enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices; Belongs to alpha/beta hydrolase superfamily; Localized in the cytoplasm; Function unclear. | 0.568 |
| CAZ95519.1 | CAZ95520.1 | ZOBELLIA_1463 | ZOBELLIA_1464 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys85 and Cys88. His89 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the cytoplasmic and/or outer membrane; Funct [...] | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | 0.584 |
| CAZ95520.1 | CAZ94267.1 | ZOBELLIA_1464 | ZOBELLIA_194 | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the outer membrane; Conserved hypothetical protein. | 0.928 |
| CAZ95520.1 | CAZ94977.1 | ZOBELLIA_1464 | ZOBELLIA_914 | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 20 and 21; Probably localized in the outer membrane; Family membership. | 0.511 |
| CAZ95520.1 | CAZ95518.1 | ZOBELLIA_1464 | ZOBELLIA_1462 | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | The alpha/beta hydrolase-fold proteins catalyse a wide range of enzymatic reactions. They are characterized by a catalytic triad, usually an serine, an aspartic acid, and an histidine; The core of enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices; Belongs to alpha/beta hydrolase superfamily; Localized in the cytoplasm; Function unclear. | 0.434 |
| CAZ95520.1 | CAZ95519.1 | ZOBELLIA_1464 | ZOBELLIA_1463 | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys85 and Cys88. His89 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the cytoplasmic and/or outer membrane; Funct [...] | 0.584 |
| CAZ95520.1 | CAZ96565.1 | ZOBELLIA_1464 | ZOBELLIA_2412 | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 22 and 23; Putatively localized in the outer membrane; Family membership. | 0.562 |
| CAZ95520.1 | CAZ97259.1 | ZOBELLIA_1464 | ZOBELLIA_3120 | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Gene very often associated with a gene encoding for a TonB-dependent receptor or transducer; Contains a lipoprotein signal peptide cleaved between the residues 25 and 26; Putatively localized in the outer membrane; Family membership. | 0.507 |
| CAZ95520.1 | CAZ97595.1 | ZOBELLIA_1464 | ZOBELLIA_3457 | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | Conserved hypothetical protein; Localized in the cytoplasm. | 0.916 |
| CAZ95520.1 | CAZ97650.1 | ZOBELLIA_1464 | ZOBELLIA_3512 | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Gene very often associated with a gene encoding for a TonB-dependent receptor or transducer; Contains a lipoprotein signal peptide cleaved between the residues 21 and 22; Probably localized in the outer membrane; Family membership. | 0.546 |
| CAZ95520.1 | CAZ97947.1 | ZOBELLIA_1464 | ZOBELLIA_3809 | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | Conserved hypothetical protein; Localized in the cytoplasm. | 0.919 |
| CAZ95520.1 | rhaA | ZOBELLIA_1464 | ZOBELLIA_3522 | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | Alpha-L-rhamnosidase, family GH78; Alpha-L-rhamnosidase catalyzes the hydrolysis of terminal non-reducing alpha-L-rhamnose residues in alpha-L-rhamnosides. It belongs to the family 78 of the glycoside hydrolases. Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; High confidence in function and specificity. | 0.488 |
| CAZ96565.1 | CAZ95520.1 | ZOBELLIA_2412 | ZOBELLIA_1464 | SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 22 and 23; Putatively localized in the outer membrane; Family membership. | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | 0.562 |
| CAZ97259.1 | CAZ95520.1 | ZOBELLIA_3120 | ZOBELLIA_1464 | SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Gene very often associated with a gene encoding for a TonB-dependent receptor or transducer; Contains a lipoprotein signal peptide cleaved between the residues 25 and 26; Putatively localized in the outer membrane; Family membership. | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | 0.507 |
| CAZ97595.1 | CAZ95520.1 | ZOBELLIA_3457 | ZOBELLIA_1464 | Conserved hypothetical protein; Localized in the cytoplasm. | This protein belongs to the family 105 of the glycoside hydrolases. These enzymes are involved in the catabolism of unsaturated oligosaccharides produced by polysaccharide lyases. Asp175 is the putative catalytic residue (identical to Asp143 of the unsaturated rhamnogalacturonyl hydrolase from Bacillus subtilis, Itoh et al., 2006, BBRC 347, 10211029). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | 0.916 |
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