STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ95559.1Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein. (98 aa)    
Predicted Functional Partners:
batD
The protein BatD is a membrane protein belonging to the Bat operon (Bacteroides aerotolerance). Its exact function is unknown. Contains a C-terminal transmembrane helices; Localized in the cytoplasmic membrane; Function unclear.
       0.592
batE
The protein BatE is a membrane protein belonging to the Bat operon (Bacteroides aerotolerance). Its exact function is unknown; Contains two N-terminal Tetratricopeptide repeats, two central transmembrane helices and a C-terminal bacterial SH3 domain; Localized in the cytoplasmic membrane; Function unclear.
       0.592
CAZ95560.1
Hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Hypothetical protein.
       0.572
batB
The protein BatB is a membrane protein belonging to the Bat operon (Bacteroides aerotolerance). Its exact function is unknown; Contains two N-terminal a transmembrane helices, three von Willebrand factor type A domain and a C-terminal transmembrane helix; Localized in the cytoplasmic membrane; Function unclear.
       0.501
batC
The protein BatC is a conserved protein belonging to the Bat operon (Bacteroides aerotolerance). Its exact function is unknown. Contains three N-terminal Tetratricopeptide repeats; Signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Function unclear.
       0.500
CAZ95552.1
vWA domain protein; Conserved protein belonging to the von Willebrand factor type A (vWA) domain family. Some VWA domain proteins have been proposed to function with MoxR-like ATPases to form a chaperone system involved in the activation of proteins by primarily mediating the insertion of metal cofactors into the substrate molecules; Localized in the cytoplasm; Family membership.
       0.403
CAZ95553.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
       0.403
batA
The protein BatA is a membrane protein belonging to the Bat operon (Bacteroides aerotolerance). Its exact function is unknown. Contains two N-terminal a transmembrane helices, three von Willebrand factor type A domain and a C-terminal transmembrane helix; Localized in the cytoplasmic membrane; Function unclear.
       0.403
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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