STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94230.1The major facilitator superfamily (MFS) transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients; Contains 11 transmembrane segments; Localized in the cytoplasmic membrane; Family membership. (416 aa)    
Predicted Functional Partners:
CAZ94178.1
Conserved hypothetical lipoprotein; Protein that contains a N-terminal domain of about 740 residues whithout any similarity then, in the C-terminal part a PKD domain and a C-type cytochrome domain are present; Lipoprotein with a signal peptide cleaved between the residues 18 and 19, Localized in the cytoplasmic or outer membrane (or both); Conserved hypothetical protein.
 
    0.669
CAZ94133.1
Conserved protein belonging to the DUF1080 family. Features a signal peptide cleaved between the residues 21 and 22. Localized in the periplasm; Conserved hypothetical protein.
 
     0.641
CAZ98821.1
Conserved hypothetical protein; Protein belonging to the DUF718 family, which includes the rhamnose mutarotase YiiL from Escherichia coli; Localized in the cytoplasm.
 
  
 0.621
CAZ94984.1
Large conserved protein containing a C-terminal cytochrome c. Cytochromes c typically function in electron transfer, but c-type cytochrome centers are also found in the active sites of many enzymes. Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 14 and 15; Localized in the outer membrane; Family membership.
  
     0.603
CAZ95737.1
Conserved hypothetical lipoprotein; Contains a domain of unknown function (DUF1080) that may adopt a concavalin-like or glucanase-like fold; Prokaryotic lipoprotein signal peptide cleaved between the residues 17 and 18; Localized in the outer membrane; Conserved hypothetical protein.
 
     0.517
CAZ97313.1
NAD(P)-dependent dehydrogenase belonging to the Rossmann fold family; Contains a twin-arginine translocation signal peptide cleaved between the residues 30 and 31; Localized in the periplasmic space; Specificity unclear.
 
    0.512
CAZ94251.1
Conserved hypothetical periplasmic protein; This protein likely adopts a beta-propeller fold; Contains a twin-arginine signal peptide; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.485
CAZ96096.1
Hypothetical periplasmic protein; This protein likely adopts a beta-propeller fold; Contains a twin-arginine signal peptide; Localized in the periplasmic space; Family membership.
  
     0.465
CAZ95865.1
Conserved hypothetical protein; Contains two transmembrane segments; Protein probably localized in the cytoplasmic membrane.
 
     0.464
CAZ94621.1
Cytochrome c-containing protein; Protein containing a N-terminal beta-propeller fold domain, three central PBS lyase HEAT-like repeats and a C-terminal cytochrome c domain. Cytochromes c typically function in electron transfer, but c-type cytochrome centers are also found in the active sites of many enzymes. Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 22 and 23; Localized in the outer membrane; Function unclear.
 
     0.461
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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