node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAZ95679.1 | CAZ95683.1 | ZOBELLIA_1624 | ZOBELLIA_1628 | Rubredoxin family protein; Conserved protein containing a C-terminal Rubredoxin-like domain. The most conserved feature of the rubredoxin-like domain is the cluster of four cysteines involved in iron binding (Cys-x-x-Cys-x(n)-Cys-x-x-Cys). This domain folds into a short three-stranded antiparallel beta-sheet and a number of loops; Localized in the cytoplasm; Family membership. | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein. | 0.838 |
CAZ95679.1 | CAZ95689.1 | ZOBELLIA_1624 | ZOBELLIA_1634 | Rubredoxin family protein; Conserved protein containing a C-terminal Rubredoxin-like domain. The most conserved feature of the rubredoxin-like domain is the cluster of four cysteines involved in iron binding (Cys-x-x-Cys-x(n)-Cys-x-x-Cys). This domain folds into a short three-stranded antiparallel beta-sheet and a number of loops; Localized in the cytoplasm; Family membership. | Nitrate/nitrite-specific MFS transporter protein; Putatively involved in the uptake of nitrate or extrusion of nitrite; The proteins contains 12 transmembrane segments; Localized in the cytoplasmic membrane; Function unclear. | 0.821 |
CAZ95679.1 | CAZ95694.1 | ZOBELLIA_1624 | ZOBELLIA_1639 | Rubredoxin family protein; Conserved protein containing a C-terminal Rubredoxin-like domain. The most conserved feature of the rubredoxin-like domain is the cluster of four cysteines involved in iron binding (Cys-x-x-Cys-x(n)-Cys-x-x-Cys). This domain folds into a short three-stranded antiparallel beta-sheet and a number of loops; Localized in the cytoplasm; Family membership. | The sensor histidine kinase belongs to two-component signal transduction systems. It catalyzes the ATP dependent autophosphorylation of a conserved histidine in its phosphoacceptor domain and the signal dependent phosphorylation of a conserved aspartic acid present in the response regulator receiver domain; Contains two transmembrane segments and an N-terminal PAS/PAC domain involved in many signalling proteins where they are used as a signal sensor domain; Localized in the cytoplasmic membrane; Family membership. | 0.792 |
CAZ95679.1 | narB/nirB | ZOBELLIA_1624 | ZOBELLIA_1625 | Rubredoxin family protein; Conserved protein containing a C-terminal Rubredoxin-like domain. The most conserved feature of the rubredoxin-like domain is the cluster of four cysteines involved in iron binding (Cys-x-x-Cys-x(n)-Cys-x-x-Cys). This domain folds into a short three-stranded antiparallel beta-sheet and a number of loops; Localized in the cytoplasm; Family membership. | Respiratory nitrate/nitrite reductase; Bifunctional enzyme involved in the denitrification processes (nitrate respiration). It contains in its N-terminal part a nitrate reductase module required for nitrate assimilation (reducing nitrate to nitrite) using molybdopterin and 1 4Fe-4S cluster as cofactors and in its C-terminal part a nitrite reductase module required for nitrite assimilation (reducing nitrite to ammonia) using FAD, 4Fe-4S cluster and siroheme as cofactors; Belongs to Belongs to the prokaryotic molybdopterin-containing oxidoreductase family and to the nitrite and sulfite r [...] | 0.997 |
CAZ95679.1 | nirB | ZOBELLIA_1624 | ZOBELLIA_1636 | Rubredoxin family protein; Conserved protein containing a C-terminal Rubredoxin-like domain. The most conserved feature of the rubredoxin-like domain is the cluster of four cysteines involved in iron binding (Cys-x-x-Cys-x(n)-Cys-x-x-Cys). This domain folds into a short three-stranded antiparallel beta-sheet and a number of loops; Localized in the cytoplasm; Family membership. | Nitrite reductase, required for nitrite assimilation (reducing nitrite to ammonia), catalyzes the second step of nitrate assimilation (denitrification); Binds 1 siroheme and 1 2Fe-2S cluster, uses FAD as cofactor; It is an homodimer which associates with nirD; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family; Localized in the cytoplasm; High confidence in function and specificity. | 0.975 |
CAZ95679.1 | nirD | ZOBELLIA_1624 | ZOBELLIA_1637 | Rubredoxin family protein; Conserved protein containing a C-terminal Rubredoxin-like domain. The most conserved feature of the rubredoxin-like domain is the cluster of four cysteines involved in iron binding (Cys-x-x-Cys-x(n)-Cys-x-x-Cys). This domain folds into a short three-stranded antiparallel beta-sheet and a number of loops; Localized in the cytoplasm; Family membership. | Nitrite reductase, small subunit; Protein that consists of a Rieske domain; The rieske domain has a 2Fe-2S centre; Associates with NirB and is required for activity reductase of NirB; High confidence in function and specificity. | 0.832 |
CAZ95683.1 | CAZ95679.1 | ZOBELLIA_1628 | ZOBELLIA_1624 | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein. | Rubredoxin family protein; Conserved protein containing a C-terminal Rubredoxin-like domain. The most conserved feature of the rubredoxin-like domain is the cluster of four cysteines involved in iron binding (Cys-x-x-Cys-x(n)-Cys-x-x-Cys). This domain folds into a short three-stranded antiparallel beta-sheet and a number of loops; Localized in the cytoplasm; Family membership. | 0.838 |
CAZ95683.1 | CAZ95688.1 | ZOBELLIA_1628 | ZOBELLIA_1633 | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein. | cAMP-binding dependent transcriptionnal regulator; This protein complexes with cAMP via an N-terminal cyclic nucleotide-binding domain and binds to specific DNA sites, via a C-terminal crp-type HTH domain, near the promoter to regulate the transcription of several catabolite-sensitive operons. The protein induces a severe bend in the DNA; Family membership. | 0.491 |
CAZ95683.1 | CAZ95689.1 | ZOBELLIA_1628 | ZOBELLIA_1634 | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein. | Nitrate/nitrite-specific MFS transporter protein; Putatively involved in the uptake of nitrate or extrusion of nitrite; The proteins contains 12 transmembrane segments; Localized in the cytoplasmic membrane; Function unclear. | 0.722 |
CAZ95683.1 | CAZ95694.1 | ZOBELLIA_1628 | ZOBELLIA_1639 | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein. | The sensor histidine kinase belongs to two-component signal transduction systems. It catalyzes the ATP dependent autophosphorylation of a conserved histidine in its phosphoacceptor domain and the signal dependent phosphorylation of a conserved aspartic acid present in the response regulator receiver domain; Contains two transmembrane segments and an N-terminal PAS/PAC domain involved in many signalling proteins where they are used as a signal sensor domain; Localized in the cytoplasmic membrane; Family membership. | 0.752 |
CAZ95683.1 | narB/nirB | ZOBELLIA_1628 | ZOBELLIA_1625 | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein. | Respiratory nitrate/nitrite reductase; Bifunctional enzyme involved in the denitrification processes (nitrate respiration). It contains in its N-terminal part a nitrate reductase module required for nitrate assimilation (reducing nitrate to nitrite) using molybdopterin and 1 4Fe-4S cluster as cofactors and in its C-terminal part a nitrite reductase module required for nitrite assimilation (reducing nitrite to ammonia) using FAD, 4Fe-4S cluster and siroheme as cofactors; Belongs to Belongs to the prokaryotic molybdopterin-containing oxidoreductase family and to the nitrite and sulfite r [...] | 0.698 |
CAZ95683.1 | nirD | ZOBELLIA_1628 | ZOBELLIA_1637 | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein. | Nitrite reductase, small subunit; Protein that consists of a Rieske domain; The rieske domain has a 2Fe-2S centre; Associates with NirB and is required for activity reductase of NirB; High confidence in function and specificity. | 0.581 |
CAZ95688.1 | CAZ95683.1 | ZOBELLIA_1633 | ZOBELLIA_1628 | cAMP-binding dependent transcriptionnal regulator; This protein complexes with cAMP via an N-terminal cyclic nucleotide-binding domain and binds to specific DNA sites, via a C-terminal crp-type HTH domain, near the promoter to regulate the transcription of several catabolite-sensitive operons. The protein induces a severe bend in the DNA; Family membership. | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein. | 0.491 |
CAZ95688.1 | CAZ95689.1 | ZOBELLIA_1633 | ZOBELLIA_1634 | cAMP-binding dependent transcriptionnal regulator; This protein complexes with cAMP via an N-terminal cyclic nucleotide-binding domain and binds to specific DNA sites, via a C-terminal crp-type HTH domain, near the promoter to regulate the transcription of several catabolite-sensitive operons. The protein induces a severe bend in the DNA; Family membership. | Nitrate/nitrite-specific MFS transporter protein; Putatively involved in the uptake of nitrate or extrusion of nitrite; The proteins contains 12 transmembrane segments; Localized in the cytoplasmic membrane; Function unclear. | 0.801 |
CAZ95688.1 | narB/nirB | ZOBELLIA_1633 | ZOBELLIA_1625 | cAMP-binding dependent transcriptionnal regulator; This protein complexes with cAMP via an N-terminal cyclic nucleotide-binding domain and binds to specific DNA sites, via a C-terminal crp-type HTH domain, near the promoter to regulate the transcription of several catabolite-sensitive operons. The protein induces a severe bend in the DNA; Family membership. | Respiratory nitrate/nitrite reductase; Bifunctional enzyme involved in the denitrification processes (nitrate respiration). It contains in its N-terminal part a nitrate reductase module required for nitrate assimilation (reducing nitrate to nitrite) using molybdopterin and 1 4Fe-4S cluster as cofactors and in its C-terminal part a nitrite reductase module required for nitrite assimilation (reducing nitrite to ammonia) using FAD, 4Fe-4S cluster and siroheme as cofactors; Belongs to Belongs to the prokaryotic molybdopterin-containing oxidoreductase family and to the nitrite and sulfite r [...] | 0.476 |
CAZ95689.1 | CAZ95679.1 | ZOBELLIA_1634 | ZOBELLIA_1624 | Nitrate/nitrite-specific MFS transporter protein; Putatively involved in the uptake of nitrate or extrusion of nitrite; The proteins contains 12 transmembrane segments; Localized in the cytoplasmic membrane; Function unclear. | Rubredoxin family protein; Conserved protein containing a C-terminal Rubredoxin-like domain. The most conserved feature of the rubredoxin-like domain is the cluster of four cysteines involved in iron binding (Cys-x-x-Cys-x(n)-Cys-x-x-Cys). This domain folds into a short three-stranded antiparallel beta-sheet and a number of loops; Localized in the cytoplasm; Family membership. | 0.821 |
CAZ95689.1 | CAZ95683.1 | ZOBELLIA_1634 | ZOBELLIA_1628 | Nitrate/nitrite-specific MFS transporter protein; Putatively involved in the uptake of nitrate or extrusion of nitrite; The proteins contains 12 transmembrane segments; Localized in the cytoplasmic membrane; Function unclear. | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein. | 0.722 |
CAZ95689.1 | CAZ95688.1 | ZOBELLIA_1634 | ZOBELLIA_1633 | Nitrate/nitrite-specific MFS transporter protein; Putatively involved in the uptake of nitrate or extrusion of nitrite; The proteins contains 12 transmembrane segments; Localized in the cytoplasmic membrane; Function unclear. | cAMP-binding dependent transcriptionnal regulator; This protein complexes with cAMP via an N-terminal cyclic nucleotide-binding domain and binds to specific DNA sites, via a C-terminal crp-type HTH domain, near the promoter to regulate the transcription of several catabolite-sensitive operons. The protein induces a severe bend in the DNA; Family membership. | 0.801 |
CAZ95689.1 | CAZ95694.1 | ZOBELLIA_1634 | ZOBELLIA_1639 | Nitrate/nitrite-specific MFS transporter protein; Putatively involved in the uptake of nitrate or extrusion of nitrite; The proteins contains 12 transmembrane segments; Localized in the cytoplasmic membrane; Function unclear. | The sensor histidine kinase belongs to two-component signal transduction systems. It catalyzes the ATP dependent autophosphorylation of a conserved histidine in its phosphoacceptor domain and the signal dependent phosphorylation of a conserved aspartic acid present in the response regulator receiver domain; Contains two transmembrane segments and an N-terminal PAS/PAC domain involved in many signalling proteins where they are used as a signal sensor domain; Localized in the cytoplasmic membrane; Family membership. | 0.624 |
CAZ95689.1 | napA | ZOBELLIA_1634 | ZOBELLIA_3212 | Nitrate/nitrite-specific MFS transporter protein; Putatively involved in the uptake of nitrate or extrusion of nitrite; The proteins contains 12 transmembrane segments; Localized in the cytoplasmic membrane; Function unclear. | Periplasmic nitrate reductase, catalytic subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | 0.941 |