Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ95721.1 | CAZ95722.1 | ZOBELLIA_1667 | ZOBELLIA_1668 | This protein belongs to the radical SAM family. These enzymes catalyze diverse reactions, including unusual methylations, isomerization, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. They generate a radical species by reductive cleavage of S-adenosylmethionine (SAM) through an unusual Fe-S center; Localized in the cytoplasm; Family membership. | Conserved hypothetical membrane protein; Contains one C-terminal transmembrane segment; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | 0.727 |
| CAZ95721.1 | dusB | ZOBELLIA_1667 | ZOBELLIA_1665 | This protein belongs to the radical SAM family. These enzymes catalyze diverse reactions, including unusual methylations, isomerization, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. They generate a radical species by reductive cleavage of S-adenosylmethionine (SAM) through an unusual Fe-S center; Localized in the cytoplasm; Family membership. | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.555 |
| CAZ95721.1 | lgtA | ZOBELLIA_1667 | ZOBELLIA_1666 | This protein belongs to the radical SAM family. These enzymes catalyze diverse reactions, including unusual methylations, isomerization, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. They generate a radical species by reductive cleavage of S-adenosylmethionine (SAM) through an unusual Fe-S center; Localized in the cytoplasm; Family membership. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | 0.951 |
| CAZ95722.1 | CAZ95721.1 | ZOBELLIA_1668 | ZOBELLIA_1667 | Conserved hypothetical membrane protein; Contains one C-terminal transmembrane segment; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | This protein belongs to the radical SAM family. These enzymes catalyze diverse reactions, including unusual methylations, isomerization, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. They generate a radical species by reductive cleavage of S-adenosylmethionine (SAM) through an unusual Fe-S center; Localized in the cytoplasm; Family membership. | 0.727 |
| CAZ95722.1 | dusB | ZOBELLIA_1668 | ZOBELLIA_1665 | Conserved hypothetical membrane protein; Contains one C-terminal transmembrane segment; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.522 |
| CAZ95722.1 | lgtA | ZOBELLIA_1668 | ZOBELLIA_1666 | Conserved hypothetical membrane protein; Contains one C-terminal transmembrane segment; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | 0.726 |
| asdA | dusB | ZOBELLIA_1523 | ZOBELLIA_1665 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.442 |
| dusB | CAZ95721.1 | ZOBELLIA_1665 | ZOBELLIA_1667 | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | This protein belongs to the radical SAM family. These enzymes catalyze diverse reactions, including unusual methylations, isomerization, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. They generate a radical species by reductive cleavage of S-adenosylmethionine (SAM) through an unusual Fe-S center; Localized in the cytoplasm; Family membership. | 0.555 |
| dusB | CAZ95722.1 | ZOBELLIA_1665 | ZOBELLIA_1668 | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Conserved hypothetical membrane protein; Contains one C-terminal transmembrane segment; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | 0.522 |
| dusB | asdA | ZOBELLIA_1665 | ZOBELLIA_1523 | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.442 |
| dusB | lgtA | ZOBELLIA_1665 | ZOBELLIA_1666 | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | 0.570 |
| dusB | miaA | ZOBELLIA_1665 | ZOBELLIA_4756 | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | tRNA isopentenyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.419 |
| dusB | panC | ZOBELLIA_1665 | ZOBELLIA_1411 | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.539 |
| dusB | polA | ZOBELLIA_1665 | ZOBELLIA_2349 | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | DNA polymerase I (POL I); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.493 |
| dusB | priA | ZOBELLIA_1665 | ZOBELLIA_29 | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Primosomal protein N' (replication factor Y); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.560 |
| dusB | proS | ZOBELLIA_1665 | ZOBELLIA_2765 | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | 0.555 |
| dusB | truA1 | ZOBELLIA_1665 | ZOBELLIA_2774 | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.441 |
| lgtA | CAZ95721.1 | ZOBELLIA_1666 | ZOBELLIA_1667 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | This protein belongs to the radical SAM family. These enzymes catalyze diverse reactions, including unusual methylations, isomerization, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. They generate a radical species by reductive cleavage of S-adenosylmethionine (SAM) through an unusual Fe-S center; Localized in the cytoplasm; Family membership. | 0.951 |
| lgtA | CAZ95722.1 | ZOBELLIA_1666 | ZOBELLIA_1668 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | Conserved hypothetical membrane protein; Contains one C-terminal transmembrane segment; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | 0.726 |
| lgtA | dusB | ZOBELLIA_1666 | ZOBELLIA_1665 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.570 |
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