STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94090.1Putative membrane lipoprotein; Lipoprotein signal peptide cleaved between the residues 16 and 17; Putatively localized in the outer membrane; Hypothetical protein. (285 aa)    
Predicted Functional Partners:
CAZ94089.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (25-102) and the Plug module (119-226) acting as a channel gate; The signal peptide is cleaved between the residues 21 and 22; Family membership.
 
     0.925
CAZ94091.1
Putative membrane protein; Contains two transmembrane segmemnts; Localized in the cytoplasmic membrane; Hypothetical protein.
 
     0.731
CAZ96538.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane segment; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.641
CAZ95252.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.608
CAZ97830.1
Conserved hypothetical membrane protein; Contains a C-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.597
CAZ95408.1
Conserved protein belonging to the 4'-phosphopantetheinyl transferase family; The members of this family activates enzymes and carrier proteins, by transferring the phophopantethiene prosthetic group of coenzyme A to its attachment site (a serine residue). Many members of the family are small proteins that act on the acyl carrier protein involved in fatty acid biosynthesis; Uses magnesium ion as cofactor; Localized in the cytoplasm; Family membership.
  
     0.588
CAZ96741.1
Aldose 1-epimerase family protein; Enzymes that probably binds carbohydrates and that act on sugars; The protein consists to an aldose 1-epimerase domain; Its exact function is unknown; Localized in the cytoplasm; Family membership.
  
     0.560
icdA
Isocitrate dehydrogenase NADP-dependent, monomeric type; NADP(+)-dependent isocitrate dehydrogenase (ICD) is an important enzyme of the intermediary metabolism, as it controls the carbon flux within the citric acid cycle and supplies the cell to 2-oxoglutarate and NADPH for biosynthetic purposes; The activity of this enzyme, which is controlled by phosphorylation, helps regulate carbon flux between the Krebs cycle and the glyoxylate bypass, which is an alternate route that accumulates carbon for biosynthesis when acetate is the sole carbon source for growth; Localized in the cytoplasm; [...]
       0.533
CAZ94800.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.531
CAZ96730.1
Conserved hypothetical lipoprotein; Signal peptide of lipoprotein cleaved between the residues 16 and 17; Putatively localized in the outer membrane; Conserved hypothetical protein.
  
     0.484
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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