STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94248.1Conserved hypothetical membrane protein; Contains five transmembrane helices in the N-terminal region; Contains a central motif reminiscent of the Planctomycete cytochrome C motif; Localized in the cytoplasmic membrane; Conserved hypothetical protein. (701 aa)    
Predicted Functional Partners:
CAZ94249.1
Conserved hypothetical periplasmic protein; Protein containing a domain of unknown function DUF1501; Belongs to the alkaline-phosphatase clan; Contains a twin-arginine signal peptide; Localized in the periplasmic space; Family membership.
 
     0.947
CAZ94250.1
Cytochrome c-containing protein; This protein has a modular architecture with a N-terminal cytochrome C and two domains of unknown function, a DUF1549 domain which includes a second cytochrome C and a C-terminal DUF1553 domain. Cytochromes c typically function in electron transfer, but c-type cytochrome centers are also found in the active sites of many enzymes. Contains a putative lipoprotein signal peptide cleaved between the residues 17 and 18; Possibly localized in the outer membrane; Function unclear.
 
     0.939
CAZ94251.1
Conserved hypothetical periplasmic protein; This protein likely adopts a beta-propeller fold; Contains a twin-arginine signal peptide; Localized in the periplasmic space; Conserved hypothetical protein.
     0.939
CAZ96096.1
Hypothetical periplasmic protein; This protein likely adopts a beta-propeller fold; Contains a twin-arginine signal peptide; Localized in the periplasmic space; Family membership.
     0.781
CAZ97540.1
Conserved hypothetical protein; Localized in the cytoplasm.
    
 0.781
CAZ98823.1
This protein likely adopts a beta-propeller fold. Features a twin-arginine signal peptide. Localized in the periplasm; Family membership.
 
     0.780
CAZ95189.1
Conserved hypothetical protein belonging to the DUF1501 family, in the alkaline-phosphatase clan; Contains a twin-arginine signal peptide; Localized in the periplasmic space.
 
     0.773
CAZ95013.1
Conserved hypothetical protein (family DUF1501). Belongs to the alkaline-phosphatase clan. Features a twin-arginine signal peptide. Localized in the periplasm; Family membership.
 
     0.773
CAZ96094.1
Conserved hypothetical periplasmic protein; Contains a domain of unknown function DUF1501; Belongs to the alkaline-phosphatase clan; Contains a twin-arginine signal peptide; Localized in the periplasmic space; Family membership.
 
     0.772
CAZ95190.1
Modular protein with a N-terminal cytochrome C Planctomycetes specific, and two domains of unknown function (DUF1549 and DUF1553) always associated with the Planctomycete cytochrome C domain. Cytochromes C typically function in electron transfer, but c-type cytochrome centers are also found in the active sites of many enzymes; This protein could result of a lateral transfer from a Planctomycetes; Contains an uncleavable signal peptide; Localized in the cytoplasmic membrane; Function unclear.
 
     0.771
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.