STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94091.1Putative membrane protein; Contains two transmembrane segmemnts; Localized in the cytoplasmic membrane; Hypothetical protein. (80 aa)    
Predicted Functional Partners:
CAZ95774.1
Outer membrane protein belonging to the OmpH family. OmpH acts as a channel-forming transmembrane porin. OmpH is a molecular chaperone that interacts with unfolded proteins as they emerge in the periplasm from the Sec translocation machinery; Localized in the outer membrane; Family membership.
  
     0.749
CAZ95853.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.733
CAZ94090.1
Putative membrane lipoprotein; Lipoprotein signal peptide cleaved between the residues 16 and 17; Putatively localized in the outer membrane; Hypothetical protein.
 
     0.731
CAZ98677.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.725
CAZ94548.1
RmlD substrate binding domain family protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
     0.709
CAZ94089.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (25-102) and the Plug module (119-226) acting as a channel gate; The signal peptide is cleaved between the residues 21 and 22; Family membership.
       0.675
CAZ94189.1
Conserved hypothetical membrane protein; Contains one C-terminal transmembrane helix. Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.674
CAZ94574.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.672
CAZ98170.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.654
CAZ95348.1
Conserved hypothetical protein; Protein that consists of a LysE type translocator domain with six transmembrane segments; Probably localized in the cytoplasmic memmbrane.
  
     0.652
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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