STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ95865.1Conserved hypothetical protein; Contains two transmembrane segments; Protein probably localized in the cytoplasmic membrane. (350 aa)    
Predicted Functional Partners:
CAZ95491.1
Conserved protein belonging to the DUF1080 family; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasm; Conserved hypothetical protein.
 
     0.681
CAZ94618.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.627
CAZ95866.1
Putative protein.
       0.613
CAZ97691.1
Conserved hypothetical lipoprotein; Protein that consists of two domains of unknown function DUF1080; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 28 and 29; Localized in the outer membrane; Conserved hypothetical protein.
     0.596
CAZ97783.1
Conserved protein belonging to the DUF1080 family. Contains a signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space.
 
     0.585
CAZ94133.1
Conserved protein belonging to the DUF1080 family. Features a signal peptide cleaved between the residues 21 and 22. Localized in the periplasm; Conserved hypothetical protein.
  
     0.578
CAZ97188.1
Large protein containing a C-terminal cytochrome C domain. Cytochromes c typically function in electron transfer, but c-type cytochrome centers are also found in the active sites of many enzymes; Contains a putative lipoprotein signal peptide cleaved between the residues 19 and 20; Possibly localized in the outer membrane; Family membership.
     0.566
CAZ95864.1
Aminotransferases use the Pyridoxal phosphate as cofactor bound by covalent linkage to a lysine residue; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family; Localized in the cytoplasm; Specificity unclear.
       0.564
CAZ97478.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.521
CAZ98759.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.521
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.