STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ95922.1Conserved hypothetical periplasmic protein; Contains a N-terminal GumN domain (unknown function); Signal peptide cleaved between the residues 17 and 18; Localized in the periplasmic space; Family membership. (1174 aa)    
Predicted Functional Partners:
CAZ95921.1
Conserved protein belonging to the DUF1460 family. Features a signal peptide cleaved between the residues 19 and 20. Localized in the periplasm; Family membership.
 
     0.768
CAZ95920.1
Putative protein.
       0.737
CAZ97996.1
Conserved hypothetical protein. Localized in the cytoplasm.
  
     0.558
CAZ96881.1
Conserved hypothetical membrane protein; Contains an N-terminal transmembrane segments and a putative C-terminal NUDIX (NUcleoside DIphosphate linked to some other moiety X) domain; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.516
CAZ95807.1
Conserved hypothetical membrane protein; Contains eight transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.494
CAZ95923.1
Mechanosensitive channels provide protection against hypo-osmotic shock, responding both to stretching of the cell membrane and to membrane depolarisation; Contains four transmembrane helices; Belongs to the small- conductance MS channels; Localized in the cytoplasmic membrane; Specificity unclear.
       0.492
CAZ94800.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.465
CAZ94146.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 19 and 20; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.450
CAZ95764.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.442
CAZ94686.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.431
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.