STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ95931.1Putative exported protein; Signal peptide cleaved between the rsidues 21 and 22; Probably localized in the periplasmic space; Hypothetical protein. (516 aa)    
Predicted Functional Partners:
CAZ95932.1
Conserved hypothetical protein; Cytoplasmic protein that contains a SAM domain.
       0.718
crtA
3-hydroxybutyryl-CoA dehydratase; Enzyme, also called crotonase, that participates to the fatty acid metabolism in the Butyrate/butanol-producing pathway; High confidence in function and specificity; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.661
CAZ95933.1
Conserved hypothetical periplasmic protein; Signal peptide cleaved between the residues 19 and 20; localized in the periplasmic space; Conserved hypothetical protein.
       0.536
CAZ95929.1
The sensor histidine kinase belongs to two-component signal transduction systems. It catalyzes the ATP dependent autophosphorylation of a conserved histidine in its phosphoacceptor domain and the signal dependent phosphorylation of a conserved aspartic acid present in the response regulator receiver domain; Contains an HAMP domain and one transmembrane segments; Localized in the cytoplasmic membrane; Family membership.
       0.529
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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