STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ95975.1FAD-dependent oxidoreductase; Belongs to the GMC oxidoreductase family; Localized in the cytoplasm; Specificity unclear. (567 aa)    
Predicted Functional Partners:
CAZ95976.1
This protein belongs to the xylose isomerase-like TIM barrel family; Adopts a TIM alpha/beta barrel fold; Localized in the cytoplasm; Family membership.
 
     0.812
CAZ95967.1
Conserved hypothetical membrane protein; Contains a putative putative lipoprotein signal peptide cleaved between the residues 29 and 30; Possibly localized in the cytoplasm or outer membrane; Conserved hypothetical protein.
 
 
 0.810
CAZ96363.1
Conserved hypothetical protein; Signal peptide putatively cleaved between the residues 19 and 20; Localized in tyhe periplasmic space.
 
 
 0.805
CAZ95977.1
Conserved hypothetical membrane protein; Contains a domain of unknown function (DUF1080) that may adopt a concavalin-like or glucanase-like fold founded in glycoside hydrolases; Putative lipoprotein signal peptide cleaved between the residues 16 and 17; Possibly localized in the outer membrane; Conserved hypothetical protein.
 
     0.727
CAZ98759.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.678
CAZ95971.1
Nucleoside/hydrogen symporter; This integral membrane protein transports nucleosides with a high affinity. The transport mechanism is driven by proton motive force; Contains twelve transmembrane helices; Localized in the cytoplasmic membrane; Specificity unclear.
 
     0.528
CAZ94628.1
Belongs to the xylose isomerase-like TIM barrel family. Exported by the twin-arginine translocation pathway signal; Specificity unclear.
 
     0.525
CAZ95974.1
Conserved hypothetical protein belonging to the DUF984 family; Localized in the cytoplasm.
       0.496
CAZ95972.1
NAD(P)-dependent oxidoreductase belonging to the GFO/IDH/MOCA family; Adopts a Rossmann fold; Localized in the cytoplasm; Specificity unclear.
 
    0.468
CAZ96723.1
Conserved hypothetical membrane protein; Protein consisting of a domain of unknown function DUF1080; Contains a putative lipoprotein signal peptide cleaved between the residues 16 and 17; Possibly localized in the outer membrane; Conserved hypothetical protein.
 
     0.444
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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