STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96013.1Conserved hypothetical protein; Probably localized in the cytoplasm. (122 aa)    
Predicted Functional Partners:
CAZ98186.1
This conserved protein belongs to the OmpA-like family. OmpA-like domains are thought to be responsible for non-covalent interactions with peptidoglycan; Signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space and/or in the outer membrane; Family membership.
  
     0.572
CAZ95669.1
Conserved hypothetical periplasmic protein; Contains two central TPR motifs and a C-terminal transglutaminase-like domain; Signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.543
CAZ98187.1
Conserved protein belonging to the thioredoxin family. Thioredoxins are small proteins of approximately one hundred amino-acid residues which participate in various redox reactions via the reversible oxidation of an active center disulfide bond; Signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Family membership.
  
     0.502
CAZ96012.1
Hypothetical membrane protein; Contains one transmembrane segment; Probably localized in the cytoplasmic membrane; Hypothetical protein.
       0.501
CAZ96014.1
Conserved hypothetical membrane protein; Contains three transmenbrane segments; Signal peptide cleaved between the residues 26 and 27; Localized in the cytoplasmic membrnane; Conserved hypothetical protein.
       0.476
CAZ95962.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.437
CAZ94741.1
Conserved hypothetical protein; Seems to possess a signal peptide possibly cleaved between the residues 18 and 19; Could be localized in the periplasmic space.
  
     0.424
CAZ94799.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein.
  
    0.406
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.