STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96045.1Conserved protein involved in exopolysaccharide biosynthesis. Its exact function is unknown. Contains five transmembrane helices. Localized in the cytoplasmic membrane; Function unclear. (463 aa)    
Predicted Functional Partners:
wzcA
Tyrosine-protein kinase; May be involved in the production and the transport of exopolysaccharides; Contains a N-terminal transmembrane segment; Belongs to the etk/wzc family; Localized in the cytoplasmic membrane; Specificity unclear.
 
  
 0.990
etkA
Tyrosine-protein kinase; May be involved in the production and the transport of exopolysaccharides; Contains a N-terminal transmembrane segment; Belongs to the etk/wzc family; Localized in the cytoplasmic membrane; Specificity unclear.
 
  
 0.982
ptkA
Tyrosine-protein kinase; May be involved in the production and the transport of exopolysaccharides; Contains a N-terminal and a central transmembrane segment; Putatively autophosphorylated on several Tyr residues; Belongs to the etk/wzc family; Localized in the cytoplasmic membrane; Specificity unclear.
 
  
 0.980
CAZ96046.1
Membrane protein likely involved in the export of expolysaccharide repeating units from the cytoplasm into the periplasm in a process analogous to O-unit export; Contains a C-terminal transmembrane helix; Prokaryotic lipoprotein signal peptide cleaved between the residues 18 and 19; Localized in the cytoplasmic membrane; Specificity unclear.
 
  
 0.945
gmdA
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.916
CAZ97922.1
This membrane protein is likely involved in the export of expolysaccharide repeating units from the cytoplasm into the periplasm in a process analogous to O-unit export; Contains a C-terminal transmembrane helix; lipoprotein signal peptide cleaved between the residues 31 and 32; Localized in the cytoplasmic membrane; Specificity unclear.
 
  
 0.889
CAZ97920.1
PLP-dependent aminotransferase; This enzyme belongs to pyridoxal-phosphate (PLP)-dependent aminotransferase superfamily, DegT/DnrJ/EryC1/StrS aminotransferase family; Localized in the cytoplasm; Specificity unclear.
  
 0.818
manC
Mannose-1-phosphate guanylyltransferase, also known as GDP-mannose pyrophosphorylase, is Involved in the biosynthesis of exopolysaccharides. It catalyzes the reaction: GDP + alpha-D-mannose 1-phosphate = phosphate + GDP-mannose. Localized in the cytoplasm; High confidence in function and specificity.
  
  
 0.816
CAZ95799.1
Hypothetical membrane protein; Contains nine transmembrane helices; Localized in the cytoplasmic membrane; Hypothetical protein.
  
  
 0.809
CAZ97903.1
Conserved hypothetical membrane protein; Proteins possibly involved in the synthesis of lipopolysaccharide (LPS); Contains ten transmembrane segments and a C-terminal O-Antigen Polymerase domain; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
  
 0.809
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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