STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96092.1Cytochrome c-containing protein; This protein has a modular architecture with a N-terminal cytochrome C (residues 19-136) and three domains of unknown function: a DUF1549 domain which includes a second cytochrome C (161-395), a central domain adopting a jelly roll fold (concavalin A-like, 449-666) and a C-terminal DUF1553 domain (762-1077). Cytochromes c typically function in electron transfer, but c-type cytochrome centers are also found in the active sites of many enzymes; Prokaryotic lipoprotein signal peptide cleaved between the residues 18 and 19; Localized in the cytoplasmic and/ [...] (1077 aa)    
Predicted Functional Partners:
ccoNO
Fusion of the subunits CcoN and CcoO of the Cytochrome cbb3 oxidase. Converts the ferrocytochrome to ferricytochrome. Belongs to the ccoNOQP operon. Contains 13 transmembrane helices; Localized in the cytoplasmic membrane; High confidence in function and specificity.
  
 
 0.985
CAZ96096.1
Hypothetical periplasmic protein; This protein likely adopts a beta-propeller fold; Contains a twin-arginine signal peptide; Localized in the periplasmic space; Family membership.
 
 
 0.960
CAZ96094.1
Conserved hypothetical periplasmic protein; Contains a domain of unknown function DUF1501; Belongs to the alkaline-phosphatase clan; Contains a twin-arginine signal peptide; Localized in the periplasmic space; Family membership.
 
     0.945
hmoA
Molybdopterin oxidoreductase, iron-sulfur binding subunit; Ferredoxins are iron-sulphur proteins that mediate electron transfer in a range of metabolic reactions; Contains 4 4Fe-4S type ferredoxin domains and a putatif Twin-arginine translocation pathway signal; Localized in the cytoplasmic membrane; Family membership.
  
 
 0.914
CAZ94251.1
Conserved hypothetical periplasmic protein; This protein likely adopts a beta-propeller fold; Contains a twin-arginine signal peptide; Localized in the periplasmic space; Conserved hypothetical protein.
 
 
 0.840
CAZ98823.1
This protein likely adopts a beta-propeller fold. Features a twin-arginine signal peptide. Localized in the periplasm; Family membership.
 
 
 0.840
CAZ95189.1
Conserved hypothetical protein belonging to the DUF1501 family, in the alkaline-phosphatase clan; Contains a twin-arginine signal peptide; Localized in the periplasmic space.
 
     0.779
CAZ94249.1
Conserved hypothetical periplasmic protein; Protein containing a domain of unknown function DUF1501; Belongs to the alkaline-phosphatase clan; Contains a twin-arginine signal peptide; Localized in the periplasmic space; Family membership.
 
     0.779
CAZ98824.1
Conserved hypothetical protein (family DUF1501). Belongs to the alkaline-phosphatase clan. Features a twin-arginine signal peptide. Localized in the periplasm.
 
     0.779
CAZ95013.1
Conserved hypothetical protein (family DUF1501). Belongs to the alkaline-phosphatase clan. Features a twin-arginine signal peptide. Localized in the periplasm; Family membership.
 
     0.779
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.