STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96154.1Conserved hypothetical protein; Contains a signal peptide cleaved between residues 17 and 18; Localized in the periplasmic space. (163 aa)    
Predicted Functional Partners:
CAZ96151.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.788
mcbG
Protein mcbG; Together with two other proteins, mcbE and mcbF, this protein causes immunity to the peptide antibiotic microcin, which inhibits DNA replication by induction of the SOS repair system. McbG alone can provide some protection; Localized in the cytoplasm; High confidence in function and specificity.
       0.597
CAZ96158.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
     0.573
CAZ98639.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 26 and 27; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.516
CAZ98638.1
Conserved hypothetical membrane protein; Contains a central transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.507
CAZ98741.1
Conserved hypothetical membrane protein; Contains eight transmembrane helice; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.471
CAZ95522.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 18 and 19; Localized in the cytoplasmic and/or outer membrane; Conserved hypothetical protein.
  
     0.437
CAZ95506.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.432
CAZ98530.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.429
CAZ95515.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.409
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.