STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96198.1Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein. (195 aa)    
Predicted Functional Partners:
lolA
LolA is a molecular chaperone that participates in the translocation of lipoproteins from the cytoplasmic membrane to the outer membrane. LolA forms a complex with lipoproteins that do not possess an aspartate residue after the N-terminal Cys residue; Contains a signal peptide cleaved between residues 17 and 18; Localized in the periplasmic space; High confidence in function and specificity.
 
    0.843
fabF
3-oxoacyl-[acyl-carrier-protein] synthase II, also known as beta-ketoacyl synthase II, catalyzes the condensation reaction of fatty acid synthesis by the addition of two carbons from malonyl-ACP to an acyl acceptor. FabF Has a preference for short chain acid substrates; Belongs to the Beta-ketoacyl synthase family; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.835
fabZ1
(3R)-Hydroxymyristoyl-[acyl-carrier-protein] dehydratase (FabZ) catalyses the dehydratation of beta-hydroxyacyl-ACP generated by FabG to trans-2-enoyl-ACP. This is the third step of the fatty acid elongation cycle. FabZ forms a hexamer (a trimer of dimers) where the monomer adopts a beta + alpha \hotdog\ fold; Localized in the cytoplasm; High confidence in function and specificity.
 
     0.817
CAZ96195.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 17 and 18; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.805
CAZ96200.1
Conserved hypotetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 15 and 16; Localized in the outer membrane; Conserved hypothetical protein.
       0.773
pgdA
Peptidoglycan N-acetylglucosamine deacetylase, family CE4; The peptidoglycan N-acetylglucosamine deacetylase hydrolyzes the acetyl group of N-acetylglucosamine in peptidoglycans; Belongs to the family 4 of carbohydrate esterases (CE4) and fold into a 7-stranded beta/alpha barrel; Contains two N-terminal transmembrane helices; Localized in the cytoplasmic membrane; High confidence in function and specificity.
       0.773
fabB3
3-oxoacyl-[acyl-carrier-protein] synthase, also known as beta-ketoacyl synthase, catalyzes the condensation reaction of fatty acid synthesis by the addition of two carbons from malonyl-ACP to an acyl acceptor. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids; Belongs to the Beta-ketoacyl synthase family; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.773
CAZ96190.1
Exporter / acyltransferase; This protein encompasses a N-terminal conserved domain predicted to be an exporter containing 13 transmembrane helices (residues 1-809) and a C-terminal catalytic domain belonging to the phospholipid/glycerol acyltransferase family (810-1228); Localized in the cytoplasmic membrane; Function unclear.
 
     0.717
CAZ94598.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 32 and 33; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.706
CAZ96193.1
Glycosyltransferase, family GT2; Glycosyltransferase catalyzes the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. This enzyme belongs to the family 2 of the glycosyltransferases., Features four transmembrane helices in C-terminus. Localized in the cytoplasmic membrane.,; Specificity unclear.
 
    0.664
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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