STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96224.1Conserved hypothetical protein; Localized in the cytoplasm. (132 aa)    
Predicted Functional Partners:
CAZ96223.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
     0.952
CAZ96226.1
Conserved hypothetical protein distantly related to (3R)-Hydroxymyristoyl-[acyl-carrier-protein] dehydratase (FabZ); Localized in the cytoplasm.
 
     0.926
CAZ96219.1
ABC-2 type exporter, permease component; ABC-2 Type (ATP-binding cassette) transporter membrane domain; ABC-2 type transporters are responsible for extrusion of a variety of compounds across biological membranes; Contains six transmembrane segments; The proteins form homo- or hetero-oligomeric channels, allowing ATP-mediated transport; Localized in the cytoplasmic membrane; Family membership.
 
     0.906
darA
Dialkylrecorsinol condensing enzyme; DarA catalyzes the head-to-head condensation of two beta-ketoacyl thioester intermediates (fatty acid-derived precursors) forming a dioxocyclohexene intermediate; Contains a C-terminal transmembrane helix; Localized in the cytoplasmic membrane; High confidence in function and specificity.
 
     0.898
darB
DarB is homologous to 3-oxoacyl-[acyl-carrier-protein] synthase III, also known as beta-ketoacyl-ACP synthase III (FabH), which catalyses the first condensation step within the fatty acid synthesis pathway converting the Acyl-[acyl-carrier-protein] to 3-oxoacyl-[acyl-carrier-protein]; Localized in the cytoplasm; Specificity unclear.
 
     0.897
CAZ96213.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
     0.887
CAZ96221.1
ABC transporter, ATPase component; This protein is the nucleotide-binding domain of the ABC transporters (ABC ATPase); Responsible for coupling the energy of ATP hydrolysis to conformational changes in the permease component (ABC membrane); Localized in the cytoplasm near of the cytoplasmic membrane by association with the permease component; Family membership.
 
     0.887
fabZ2
(3R)-Hydroxymyristoyl-[acyl-carrier-protein] dehydratase (FabZ) catalyses the dehydratation of beta-hydroxyacyl-ACP generated by FabG to trans-2-enoyl-ACP. This is the third step of the fatty acid elongation cycle. FabZ forms a hexamer (a trimer of dimers) where the monomer adopts a beta + alpha \hotdog\ fold; Localized in the cytoplasm; High confidence in function and specificity.
 
     0.878
lolA
LolA is a molecular chaperone that participates in the translocation of lipoproteins from the cytoplasmic membrane to the outer membrane. LolA forms a complex with lipoproteins that do not possess an aspartate residue after the N-terminal Cys residue; Contains a signal peptide cleaved between residues 17 and 18; Localized in the periplasmic space; High confidence in function and specificity.
 
     0.860
acpP2
Acyl carrier protein (ACP) is the carrier of the growing fatty acid chain in fatty acid biosynthesis. ACP is produced as an apoprotein and is converted to its active form by [ACP]synthase (AcpS); Localized in the cytoplasm; High confidence in function and specificity.
 
     0.855
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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