STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
engAEndoglucanase, family GH5; Endoglucanase catalyzes the endohydrolysis of the 1, 4-beta-D-glucosidic linkages in lichenan, cereal beta-D-glucans and carboxymethyl-cellulose and the 1,4-beta-D-xylosidic linkages in xylans. This enzyme is highly; Specificity unclear; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (397 aa)    
Predicted Functional Partners:
bglC
Endo-beta-1,4-glucanase, family GH5; BglC hydrolyzes the beta-1,4 linkages of carboxylmethylcellulose; Belongs to the family 5 of the glycoside hydrolases (GH5); Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 17 and 18; Localized in the cytoplasmic membrane; High confidence in function and specificity.
  
  
  0.953
xarB1
Xylosidase/arabinosidase, family GH3; XarB catalyzes the hydrolysis of terminal, non-reducing beta-D-xylose residues (or L-arabinose residues) with release of beta-D-xylose (or alpha-L-arabinose). This bifunctional enzyme belongs to the family 3 of the glycoside hydrolases (GH3); Contains a signal peptide cleaved between the residues 24 and 25; Localized in the periplasm; High confidence in function and specificity.
 
  
 0.916
bglA
Beta-glucosidase, family GH1; Beta-glucosidases catalyze the hydrolysis of terminal, non-reducing beta-D-glucose residues with release of beta-D-glucose; Belongs to the family 1 of the glycoside hydrolases (GH1) and adopts a (beta/alpha)8 barrel fold; Localized in the cytoplasm; High confidence in function and specificity.
    
 0.905
xarB2
Xylosidase/arabinosidase, family GH3; XarB catalyzes the hydrolysis of terminal, non-reducing beta-D-xylose residues (or L-arabinose residues) with release of beta-D-xylose (or alpha-L-arabinose). This bifunctional enzyme belongs to the family 3 of the glycoside hydrolases. Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; High confidence in function and specificity.
    
 0.904
bglX
Beta-glucosidase, family GH3; BglX catalyzes the hydrolysis of terminal, non-reducing beta-D-glucose residues with release of beta-D-glucose. Belongs to the family 3 of the glycoside hydrolases (GH3); Contains a signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; High confidence in function and specificity.
    
 0.904
xynA
Endo-beta-1,4-xylanase, family GH10; Enzyme that Endohydrolyzes the beta-1,4-D-xylosidic linkages in xylans; Belongs to the family 10 of the glycoside hydrolases (GH10); This protein is a lipoprotein with a signal peptide cleaved between the residues 18 and 19 and probably localized in the outer membrane; Contains a PKD-like domain in its N-treminal region, probably involved in protein-carbohydrate interactions; High confidence in function and specificity.
 
   
 0.677
CAZ94283.1
Hypothetical lipoprotein; Signal peptide cleaved between the residues 17 and 18; Localized in the outer membrane; Hypothetical protein.
 
     0.618
CAZ94284.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Gene very often associated with a gene encoding for a TonB-dependent receptor or transducer; Contains a lipoprotein signal peptide cleaved between the residues 19 and 20; Probably localized in the outer membrane; Family membership.
 
 
   0.606
CAZ94286.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Gene very often associated with a gene encoding for a TonB-dependent receptor or transducer; Contains a lipoprotein signal peptide cleaved between the residues 19 and 20; Probably localized in the outer membrane; Family membership.
 
 
   0.590
xynB-2
Endo-beta-1,4-xylanase, family GH10; Enzyme that Endohydrolyzes the beta-1,4-D-xylosidic linkages in xylans; Belongs to the family 10 of the glycoside hydrolases (GH10); This protein is a lipoprotein with a signal peptide cleaved between the residues 24 and 25, and probably localized in the outer membrane; High confidence in function and specificity.
 
   
 0.576
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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