STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96261.1Thiol-disulfide oxidoreductase catalyzes the formation of disulfide bond in various substrates. Its exact specificity is not known; Contains a N-terminal domain of unknown function and a C-terminal Thiol-disulfide oxidoreductase domain; Belongs to the thioredoxin family; Signal peptide cleaved between residues 18 and 19; Localized in the periplasmic space; Specificity unclear. (439 aa)    
Predicted Functional Partners:
aehA
alpha-Amino acid ester hydrolases (AEHs) catalyze the hydrolysis and synthesis of esters and amides with an alpha-amino group. They can synthesize beta-lactam antibiotics from acyl compounds and beta-lactam nuclei obtained from the hydrolysis of natural antibiotics. Belongs to the family S15 of the peptidases; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 14 and 15; Localized in the outer membrane; Specificity unclear.
       0.613
axeA
Acetyl xylan esterase, family CE7; Acetyl xylan esterase catalyzes the hydrolysis of acetyl groups of xylan; Contains a signal peptide cleaved between the residues 21 and 22; Belongs to the family 7 of carbohydrate esterases (CE7); Localized in the periplasmic space; High confidence in function and specificity.
 
     0.571
CAZ94146.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 19 and 20; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.568
CAZ96631.1
Conserved hypothetical protein; Contains a putative uncleavable signal sequence.
  
     0.548
CAZ94186.1
Conserved hypothetical membrane protein; Protein containing a putative lipoprotein signal peptide cleaved between the residues 18 and 19; Possibly localized in the outer membrane; Conserved hypothetical protein.
  
     0.547
CAZ96407.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.528
CAZ98550.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.524
CAZ97265.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.495
CAZ95433.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.490
CAZ95463.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations. Contains a Plug module (112-223) acting as a channel gate. The signal peptide is cleaved between the residues 24 and 25; Family membership.
  
     0.477
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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