STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96332.1Xylose isomerase-like TIM barrel protein. Features a signal peptide cleaved between the residues 32 and 33. Localized in the periplasm; Conserved hypothetical protein. (348 aa)    
Predicted Functional Partners:
CAZ95257.1
Conserved hypothetical membrane protein; Contains a putative lipoprotein signal peptide cleaved between the residues 15 and 16; Possibly localized in the outer membrane; Conserved hypothetical protein.
 
   
 0.708
CAZ95786.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.604
CAZ97261.1
NAD(P)-dependent dehydrogenase that belongs to the Rossmann fold family; Contains a twin-arginine translocation signal peptide; Localized in the periplasmic space; Specificity unclear.
 
    0.572
CAZ98288.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.554
CAZ97313.1
NAD(P)-dependent dehydrogenase belonging to the Rossmann fold family; Contains a twin-arginine translocation signal peptide cleaved between the residues 30 and 31; Localized in the periplasmic space; Specificity unclear.
 
    0.543
CAZ97262.1
Conserved hypothetical lipoprotein; Contains a signal peptide of lipoprotein cleaved between the residues 15 and 16; Localized in the cytoplasmic and/or outer membrane; Conserved hypothetical protein.
 
    0.532
CAZ96390.1
NAD(P)-dependent dehydrogenase; Contains a NAD- and NADP-binding domains with a core Rossmann-type fold; Belongs to the GFO/IDH/MOCA family; Contains an twin-arginine translocation signal peptide; Localized in the cytoplasm; Specificity unclear.
 
    0.464
CAZ98018.1
Conserved hypothetical protein; Protein containing a Flavin mononucleotide binding domain; Belongs to the Pyridoxamine 5'-phosphate oxidase family; Localized in the cytoplasm; Function unclear.
  
     0.439
CAZ96331.1
Adenine-specific DNA methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).
       0.436
CAZ94618.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.436
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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