STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96368.1Conserved hypothetical protein; Signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space. (570 aa)    
Predicted Functional Partners:
CAZ96370.1
Sulfatase, family S1-20; The family 1 of sulfatases is composed of enzymes that require the posttranslational oxidation of a conserved cysteine (or serine) to a catalytic formylglycine to hydrolyze various sulfate ester substrates; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 20; Contains an uncleavable signal peptide; Localized in the cytoplasmic membrane; Family membership.
 
     0.811
CAZ96369.1
Acetylesterase that belongs to the lipase-GDSL Pfam family, which includes families 3 and 12 of the carbohydrate esterases (CE3, CE12); The conserved catalytic residues are Ser38, Asp194 and His197. Lipoprotein signal peptide cleaved between the residues 21 and 22; Localized in the outer membrane; Specificity unclear.
 
     0.779
CAZ96367.1
Glycoside hydrolase that belongs to the family 36 of glycoside hydrolases (GH36); Exported in the periplasmic space by twin-arginine translocation pathway signal; Family membership.
       0.776
CAZ96371.1
Sulfatase, family S1-16; The family 1 of sulfatases is composed of enzymes that require the posttranslational oxidation of a conserved cysteine (or serine) to a catalytic formylglycine to hydrolyze various sulfate ester substrates; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 16; Signal peptide cleaved between the residues 27 and 28; Localized in the periplasmic space; Family membership.
       0.665
sgsA6
The N-sulfoglucosamine sulfohydrolase, called also Sulfoglucosamine sulfamidase is involved in the glycosaminoglycan degradation. It hydrolyzes the N-sulfate groups from the D-glucosamine-N-sulfate-6-O-sulfate residues in heparan sulfate and heparin; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 8; Localized in the cytoplasm; High confidence in function and specificity.
       0.665
CAZ95108.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Gene very often associated with a gene encoding for a TonB-dependent receptor or transducer; Contains a lipoprotein signal peptide cleaved between the residues 20 and 21; Probably localized in the outer membrane; Family membership.
  
     0.623
CAZ95109.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (31-104) and the Plug module (120-237) acting as a channel gate; The signal peptide is cleaved between the residues 27 and 28; Family membership.
  
     0.614
CAZ94248.1
Conserved hypothetical membrane protein; Contains five transmembrane helices in the N-terminal region; Contains a central motif reminiscent of the Planctomycete cytochrome C motif; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.602
CAZ94429.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a Lipocalin signature involved in the transport of small hydrophobic molecules such as steroids, bilins, retinoids, and lipids; Contains a lipoprotein signal peptide cleaved between the residues 20 and 21; Putatively localized in the outer membrane; Family membership.
  
     0.553
sgsA5
The N-sulfoglucosamine sulfohydrolase, called also Sulfoglucosamine sulfamidase is involved in the glycosaminoglycan degradation. It hydrolyzes the N-sulfate groups from the D-glucosamine-N-sulfate-6-O-sulfate residues in heparan sulfate and heparin; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 8; Contains a lipoprotein signal peptide cleaved between the residues 22 and 23; Localized in the cytoplasmic membrane or/and outer membrane; High confidence in function and specificity.
       0.520
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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