Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ95519.1 | CAZ96393.1 | ZOBELLIA_1463 | ZOBELLIA_2237 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys85 and Cys88. His89 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the cytoplasmic and/or outer membrane; Funct [...] | Conserved hypothetical membrane protein; Contains four transmembranes segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | 0.770 |
| CAZ95519.1 | CAZ96399.1 | ZOBELLIA_1463 | ZOBELLIA_2243 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys85 and Cys88. His89 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the cytoplasmic and/or outer membrane; Funct [...] | Conserved hypothetical membrane protein; Contains twelve transmembrane segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | 0.864 |
| CAZ95519.1 | nosD | ZOBELLIA_1463 | ZOBELLIA_2240 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys85 and Cys88. His89 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the cytoplasmic and/or outer membrane; Funct [...] | Copper-binding periplasmic protein; Protein which is thought to insert copper into the exported nitrous oxide reductase apoenzyme (NosZ). Belongs to the nitrous oxide reductase operon. Signal peptide cleaved between the residues 22 and 23. Localized in the periplasmic space; High confidence in function and specificity. | 0.775 |
| CAZ95519.1 | nosF | ZOBELLIA_1463 | ZOBELLIA_2241 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys85 and Cys88. His89 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the cytoplasmic and/or outer membrane; Funct [...] | Copper ABC transporter, ATPase component; This protein, involved in copper processing/transport, is the nucleotide-binding domain of the ABC transporters (ABC ATPase); Responsible for coupling the energy of ATP hydrolysis to conformational changes in the permease component (ABC membrane). Belongs to the nitrous oxide reductase operon. It is a peripheral membrane protein localized near of the cytoplasmic membrane by association with the permease component; High confidence in function and specificity. | 0.649 |
| CAZ95519.1 | nosL | ZOBELLIA_1463 | ZOBELLIA_2238 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys85 and Cys88. His89 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the cytoplasmic and/or outer membrane; Funct [...] | NosL is one of the accessory lipoproteins of the nos (nitrous oxide reductase) gene cluster. NosL is a monomeric protein that specifically and stoichiometrically binds Cu(I). The copper ion in NosL is ligated by a Cys residue, and one Met and one His are thought to serve as the other ligands. It is possible that NosL is a copper chaperone involved in metallocenter assembly. Signal peptide cleaved between the residues 17 and 18. Localized in the outer membrane; High confidence in function and specificity. | 0.771 |
| CAZ95519.1 | nosY | ZOBELLIA_1463 | ZOBELLIA_2242 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys85 and Cys88. His89 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the cytoplasmic and/or outer membrane; Funct [...] | Copper ABC importer, permease component; ABC (ATP-binding cassette) transporter, membrane domain. Proteins responsible for import of multi-copper across biological membranes. Contains six transmembrane segmemts; The proteins form homo- or hetero-oligomeric channels, allowing ATP-mediated transport; Localized in the cytoplasmic membrane; High confidence in function and specificity. | 0.774 |
| CAZ95519.1 | nosZ | ZOBELLIA_1463 | ZOBELLIA_2236 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys85 and Cys88. His89 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the cytoplasmic and/or outer membrane; Funct [...] | Nitrous-oxide reductase is a copper-containing enzyme that catalyses the two-electron reduction of the greenhouse gas N2O to N2. It is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide. Homodimer that Binds 6 copper ions per subunit. Signal peptide of lipoprotein cleaved between the residues 20 and 21. Localized in the cytoplasmic membrane; High confidence in function and specificity. | 0.795 |
| CAZ95519.1 | scdA | ZOBELLIA_1463 | ZOBELLIA_2246 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys85 and Cys88. His89 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the cytoplasmic and/or outer membrane; Funct [...] | Cell wall-related protein ScdA; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.408 |
| CAZ95519.1 | scdA-2 | ZOBELLIA_1463 | ZOBELLIA_308 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys85 and Cys88. His89 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the cytoplasmic and/or outer membrane; Funct [...] | Cell wall-related protein ScdA; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.407 |
| CAZ96391.1 | CAZ96393.1 | ZOBELLIA_2235 | ZOBELLIA_2237 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys93 and Cys96. His97 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the cytoplasmic and/or outer membrane; Family membership. | Conserved hypothetical membrane protein; Contains four transmembranes segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | 0.871 |
| CAZ96391.1 | CAZ96399.1 | ZOBELLIA_2235 | ZOBELLIA_2243 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys93 and Cys96. His97 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the cytoplasmic and/or outer membrane; Family membership. | Conserved hypothetical membrane protein; Contains twelve transmembrane segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | 0.890 |
| CAZ96391.1 | nosD | ZOBELLIA_2235 | ZOBELLIA_2240 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys93 and Cys96. His97 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the cytoplasmic and/or outer membrane; Family membership. | Copper-binding periplasmic protein; Protein which is thought to insert copper into the exported nitrous oxide reductase apoenzyme (NosZ). Belongs to the nitrous oxide reductase operon. Signal peptide cleaved between the residues 22 and 23. Localized in the periplasmic space; High confidence in function and specificity. | 0.838 |
| CAZ96391.1 | nosF | ZOBELLIA_2235 | ZOBELLIA_2241 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys93 and Cys96. His97 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the cytoplasmic and/or outer membrane; Family membership. | Copper ABC transporter, ATPase component; This protein, involved in copper processing/transport, is the nucleotide-binding domain of the ABC transporters (ABC ATPase); Responsible for coupling the energy of ATP hydrolysis to conformational changes in the permease component (ABC membrane). Belongs to the nitrous oxide reductase operon. It is a peripheral membrane protein localized near of the cytoplasmic membrane by association with the permease component; High confidence in function and specificity. | 0.812 |
| CAZ96391.1 | nosL | ZOBELLIA_2235 | ZOBELLIA_2238 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys93 and Cys96. His97 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the cytoplasmic and/or outer membrane; Family membership. | NosL is one of the accessory lipoproteins of the nos (nitrous oxide reductase) gene cluster. NosL is a monomeric protein that specifically and stoichiometrically binds Cu(I). The copper ion in NosL is ligated by a Cys residue, and one Met and one His are thought to serve as the other ligands. It is possible that NosL is a copper chaperone involved in metallocenter assembly. Signal peptide cleaved between the residues 17 and 18. Localized in the outer membrane; High confidence in function and specificity. | 0.865 |
| CAZ96391.1 | nosY | ZOBELLIA_2235 | ZOBELLIA_2242 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys93 and Cys96. His97 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the cytoplasmic and/or outer membrane; Family membership. | Copper ABC importer, permease component; ABC (ATP-binding cassette) transporter, membrane domain. Proteins responsible for import of multi-copper across biological membranes. Contains six transmembrane segmemts; The proteins form homo- or hetero-oligomeric channels, allowing ATP-mediated transport; Localized in the cytoplasmic membrane; High confidence in function and specificity. | 0.835 |
| CAZ96391.1 | nosZ | ZOBELLIA_2235 | ZOBELLIA_2236 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys93 and Cys96. His97 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the cytoplasmic and/or outer membrane; Family membership. | Nitrous-oxide reductase is a copper-containing enzyme that catalyses the two-electron reduction of the greenhouse gas N2O to N2. It is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide. Homodimer that Binds 6 copper ions per subunit. Signal peptide of lipoprotein cleaved between the residues 20 and 21. Localized in the cytoplasmic membrane; High confidence in function and specificity. | 0.915 |
| CAZ96391.1 | scdA | ZOBELLIA_2235 | ZOBELLIA_2246 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys93 and Cys96. His97 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the cytoplasmic and/or outer membrane; Family membership. | Cell wall-related protein ScdA; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.508 |
| CAZ96391.1 | scdA-2 | ZOBELLIA_2235 | ZOBELLIA_308 | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys93 and Cys96. His97 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the cytoplasmic and/or outer membrane; Family membership. | Cell wall-related protein ScdA; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.501 |
| CAZ96393.1 | CAZ95519.1 | ZOBELLIA_2237 | ZOBELLIA_1463 | Conserved hypothetical membrane protein; Contains four transmembranes segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys85 and Cys88. His89 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Probably localized in the cytoplasmic and/or outer membrane; Funct [...] | 0.770 |
| CAZ96393.1 | CAZ96391.1 | ZOBELLIA_2237 | ZOBELLIA_2235 | Conserved hypothetical membrane protein; Contains four transmembranes segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | Cytochromes c typically function in electron transfer. They are required during oxidative phosphorylation as an electron shuttle between Complex III (cytochrome c reductase) and IV (cytochrome c oxidase), but c-type cytochrome centers are also found in the active sites of many enzymes; Cytochrome c binds a heme as prosthetic group by Cys93 and Cys96. His97 is involved in iron binding; Belongs to class I (mono-heme) of Cytochrome c; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the cytoplasmic and/or outer membrane; Family membership. | 0.871 |
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