STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CAZ94304.1Putative glycoside hydrolase; Conserved protein which is predicted as a possible new glycoside hydrolase family; Belongs to the DUF377 family; Localized in the cytoplasm; Family membership. (339 aa)    
Predicted Functional Partners:
CAZ94301.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Gene very often associated with a gene encoding for a TonB-dependent receptor or transducer; Contains a lipoprotein signal peptide cleaved between the residues 18 and 19; Localized in the cytoplasmic membrane; Family membership.
 
     0.706
CAZ97761.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.674
CAZ94303.1
Conserved hypothetical lipoprotein; Seems to contain a signal peptide of lipoprotein cleaved between the residues 16 and 17; Localized in the outer membrane; Conserved hypothetical protein.
  
    0.614
CAZ97765.1
This enzyme belongs to the family 74 of the glycoside hydrolases. These proteins consist of a tandem repeat of two similar domains, which are both folded into seven-bladed beta-propeller structures. The conserved catalytic residues are Asp70 and Asp 549. Features a signal peptide cleaved between the residues 24 and 25; Specificity unclear.
 
     0.600
CAZ97762.1
Conserved hypothetical protein; This protein displays distant similarity with glycoside hydrolases of the family 74 (GH74). These proteins consist of a tandem repeat of two similar domains, which are both folded into seven-bladed beta- propeller structures. But the two conserved catalytic aspartatic residues are substituted here by two asparagine residues. Features a signal peptide cleaved between the residues 19 and 20.
 
     0.585
CAZ94300.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (28-104) and the Plug module (120-230) acting as a channel gate; The signal peptide is cleaved between the residues 25 and 26; Family membership.
 
     0.574
CAZ94302.1
Contains a lipoprotein signal peptide cleaved between the residues 19 and 20; Probably localized in the outer membrane; Hypothetical protein.
       0.498
CAZ94305.1
Sodium/glucose symporter actively transports glucose into cells by Na+ cotransport across cytoplasmic membranes of cells. Thereby the energy stored in an inwardly directed electrochemical sodium gradient (sodium motive force, SMF) is used to drive solute accumulation against a concentration gradient; Contains fourteen transmembrane helices; Localized in the cytoplasmic membrane; High confidence in function and specificity; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.491
CAZ94299.1
The AraC-type transcriptional regulators are usually involved in the positive regulation of catabolic, metabolic and transport operons; Contains a C-terminal AraC-type HTH DNA-binding domain involved in the binding of the protein to the operator sequences in the DNA and a N-terminal domain presumed to interact with effector molecules and may be involved in dimerization; Localized in the cytoplasm; Family membership.
 
     0.455
dgoA
2-Dehydro-3-deoxy-6-phosphogalactonate aldolase catalyzes the third step of the D-galactonate catabolism: 2-dehydro-3-deoxy-D-galactonate 6-phosphate = pyruvate + D-glyceraldehyde 3-phosphate. Belongs to the class I aldolase whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. Localized in the cytoplasm; High confidence in function and specificity.
   
  
 0.450
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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