Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ94307.1 | CAZ94308.1 | ZOBELLIA_234 | ZOBELLIA_235 | The alpha/beta hydrolase-fold proteins catalyse a wide range of enzymatic reactions. They are characterized by a catalytic triad, usually an serine, an aspartic acid, and an histidine; The core of enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices; Contains a N-terminal haloalkane dehalogenase domain; Belongs to alpha/beta hydrolase superfamily, dmpD/todF/xylF esterase family; Localized in the cytoplasm; Function unclear. | Several of these transcriptional regulators are repressors of genes and operons for membrane transport and cell envelope permeability; The helix-turn-helix motif is located in the initial third of the protein. The C-terminal part contains regions that can be involved in binding of inducers, which can be drugs, and oligomerization; Localized in the cytoplasm; Family membership. | 0.709 |
| CAZ94308.1 | CAZ94307.1 | ZOBELLIA_235 | ZOBELLIA_234 | Several of these transcriptional regulators are repressors of genes and operons for membrane transport and cell envelope permeability; The helix-turn-helix motif is located in the initial third of the protein. The C-terminal part contains regions that can be involved in binding of inducers, which can be drugs, and oligomerization; Localized in the cytoplasm; Family membership. | The alpha/beta hydrolase-fold proteins catalyse a wide range of enzymatic reactions. They are characterized by a catalytic triad, usually an serine, an aspartic acid, and an histidine; The core of enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices; Contains a N-terminal haloalkane dehalogenase domain; Belongs to alpha/beta hydrolase superfamily, dmpD/todF/xylF esterase family; Localized in the cytoplasm; Function unclear. | 0.709 |
| CAZ94308.1 | CAZ95076.1 | ZOBELLIA_235 | ZOBELLIA_1019 | Several of these transcriptional regulators are repressors of genes and operons for membrane transport and cell envelope permeability; The helix-turn-helix motif is located in the initial third of the protein. The C-terminal part contains regions that can be involved in binding of inducers, which can be drugs, and oligomerization; Localized in the cytoplasm; Family membership. | Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 22 and 23; Localized in the outer membrane; Hypothetical protein. | 0.402 |
| CAZ94308.1 | CAZ96814.1 | ZOBELLIA_235 | ZOBELLIA_2664 | Several of these transcriptional regulators are repressors of genes and operons for membrane transport and cell envelope permeability; The helix-turn-helix motif is located in the initial third of the protein. The C-terminal part contains regions that can be involved in binding of inducers, which can be drugs, and oligomerization; Localized in the cytoplasm; Family membership. | Beta-helix fold protein; This protein likely adopts a right handed parallel beta-helix fold. Displays also a C-terminal PKD domain; Signal peptide cleaved between the residues 28 and 29; Localized in the periplasmic space; Function unclear. | 0.450 |
| CAZ94308.1 | CAZ98507.1 | ZOBELLIA_235 | ZOBELLIA_4372 | Several of these transcriptional regulators are repressors of genes and operons for membrane transport and cell envelope permeability; The helix-turn-helix motif is located in the initial third of the protein. The C-terminal part contains regions that can be involved in binding of inducers, which can be drugs, and oligomerization; Localized in the cytoplasm; Family membership. | Hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 19 and 20; Localized in the periplasmic space; Hypothetical protein. | 0.467 |
| CAZ95076.1 | CAZ94308.1 | ZOBELLIA_1019 | ZOBELLIA_235 | Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 22 and 23; Localized in the outer membrane; Hypothetical protein. | Several of these transcriptional regulators are repressors of genes and operons for membrane transport and cell envelope permeability; The helix-turn-helix motif is located in the initial third of the protein. The C-terminal part contains regions that can be involved in binding of inducers, which can be drugs, and oligomerization; Localized in the cytoplasm; Family membership. | 0.402 |
| CAZ95076.1 | CAZ96814.1 | ZOBELLIA_1019 | ZOBELLIA_2664 | Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 22 and 23; Localized in the outer membrane; Hypothetical protein. | Beta-helix fold protein; This protein likely adopts a right handed parallel beta-helix fold. Displays also a C-terminal PKD domain; Signal peptide cleaved between the residues 28 and 29; Localized in the periplasmic space; Function unclear. | 0.770 |
| CAZ96814.1 | CAZ94308.1 | ZOBELLIA_2664 | ZOBELLIA_235 | Beta-helix fold protein; This protein likely adopts a right handed parallel beta-helix fold. Displays also a C-terminal PKD domain; Signal peptide cleaved between the residues 28 and 29; Localized in the periplasmic space; Function unclear. | Several of these transcriptional regulators are repressors of genes and operons for membrane transport and cell envelope permeability; The helix-turn-helix motif is located in the initial third of the protein. The C-terminal part contains regions that can be involved in binding of inducers, which can be drugs, and oligomerization; Localized in the cytoplasm; Family membership. | 0.450 |
| CAZ96814.1 | CAZ95076.1 | ZOBELLIA_2664 | ZOBELLIA_1019 | Beta-helix fold protein; This protein likely adopts a right handed parallel beta-helix fold. Displays also a C-terminal PKD domain; Signal peptide cleaved between the residues 28 and 29; Localized in the periplasmic space; Function unclear. | Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 22 and 23; Localized in the outer membrane; Hypothetical protein. | 0.770 |
| CAZ98507.1 | CAZ94308.1 | ZOBELLIA_4372 | ZOBELLIA_235 | Hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 19 and 20; Localized in the periplasmic space; Hypothetical protein. | Several of these transcriptional regulators are repressors of genes and operons for membrane transport and cell envelope permeability; The helix-turn-helix motif is located in the initial third of the protein. The C-terminal part contains regions that can be involved in binding of inducers, which can be drugs, and oligomerization; Localized in the cytoplasm; Family membership. | 0.467 |