STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96506.1Metallophosphoesterase; Protein that catalyzes the hydrolysis of any phospho ester bond; Contains four transmembrane segments; Binds 2 divalent metal cations; Belongs to the metallophosphoesterase superfamily; Localized in the cytoplasmic membrane; Specificity unclear. (407 aa)    
Predicted Functional Partners:
cutC
Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
       0.632
trxA-2
Thioredoxin like protein; Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond; In this protein, the catalytic cysteins are replaced by an asparagine and by a serine; Family membership.
       0.584
aspG
Glycosylasparaginases 2; Cleaves the GlcNAc-Asn bond which joins oligosaccharides to the peptide of asparagine-linked glycoproteins; Protein exported in the periplasmic space; Protein contains a Twin-arginine translocation pathway signal that does not use the standard general secretory (Sec) pathway; Heterodimer of an alpha and a beta chain; High confidence in function and specificity.
       0.460
polA
DNA polymerase I (POL I); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.437
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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