STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96518.1The protein contains a cytochrome oxydase domain in its C-terminal region (96 to 181); Signal peptide cleaved between the residues 21 and 22; putatively localised in the outer membrane; Family membership. (186 aa)    
Predicted Functional Partners:
hmoB
Molybdopterin oxidoreductase, membrane subunit; Ferredoxins are iron-sulphur proteins that mediate electron transfer in a range of metabolic reactions; Contains 10 cytoplasmic transmembrane segmemts; Belongs to the nrfD family; Localized in the cytoplasmic membrane; Family membership.
 
 
 0.999
CAZ96519.1
Protein contains 10 transmembrane segmemts; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
 
 0.999
CAZ96517.1
Conserved hypothetical protein; Contains two transmembrane segments; Localized in the cytoplasmic membrane.
 
   0.997
hmoA
Molybdopterin oxidoreductase, iron-sulfur binding subunit; Ferredoxins are iron-sulphur proteins that mediate electron transfer in a range of metabolic reactions; Contains 4 4Fe-4S type ferredoxin domains and a putatif Twin-arginine translocation pathway signal; Localized in the cytoplasmic membrane; Family membership.
 
 
 0.993
ccoNO
Fusion of the subunits CcoN and CcoO of the Cytochrome cbb3 oxidase. Converts the ferrocytochrome to ferricytochrome. Belongs to the ccoNOQP operon. Contains 13 transmembrane helices; Localized in the cytoplasmic membrane; High confidence in function and specificity.
 
 
 0.987
CAZ97347.1
This protein is the iron-sulfur subunit of a oxidoreductase of unknown specificity. It binds a 4Fe-4S cluster. This subunit interact with a membrane subunit; Localized in the cytoplasmic membrane; Specificity unclear.
 
 
 0.977
CAZ96514.1
Multiheme cytochrome c; Protein that contains in the N-terminal region (51 to 149) a CytC domain (Cyt C2) and in the C-terminal region (278 to 417) a multiheme CytC (Cyt C552); Contains two transmembrane segmemts; Signal peptide cleaved between residues 30 and 31; Belongs to the Class 1 cytochrome c family, subclass IA/ IB; Localized in the cytoplasmic membrane; Family membership.
  
 0.942
coxM
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.849
coxN
Cytochrome c oxidase is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen catalyzing the reduction of oxygen to water; Subunit I (CO I) is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred, via the copper A center of subunit II and a low-spin heme (heme a) of subunit 1, to the CuB-heme a3 (or heme o) bimetallic center of subunit 1; contains 12 transmembrane segmemts; Localized in the cytoplasmic membrane; High confidence in function and specificity.
  
 
 0.716
CAZ96942.1
Rieske [2Fe-2S] iron-sulfur protein; Protein that contains an unknown function N-terminal domain and a C-terminal Rieske [2Fe-2S] domain; The rieske domain has a [2Fe-2S] centre. Two conserved cysteines that one Fe ion while the other Fe ion is coordinated by two conserved histidines; Prokaryotic lipoprotein signal peptide cleaved between the residues 25 and 26; Localized in the outer membrane; Function unclear.
 
 
 0.705
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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