STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96526.1Conserved transporter belonging to the Major Facilitator Superfamily. Features eleven transmembrane helices. Localized in the cytoplasmic membrane; Family membership. (441 aa)    
Predicted Functional Partners:
pgmB
Beta-phosphoglucomutase is involved in maltose metabolism. It catalyzes the reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate. Localized in the cytoplasm; High confidence in function and specificity.
 
  
 0.558
maeB
Bifunctional protein: Malic enzyme (N-terminal domain, 1 to 550) and Phosphate acetyl/butaryl transferase (C-terminal domain, 550 to 765); High confidence in function and specificity.
       0.537
ruvB
Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.508
queG
4Fe-4S ferredoxin; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.
       0.507
CAZ94389.1
Alpha-glucosidase, family GH97; Alpha-glucosidases catalyse the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose. Involved in carbohydrate metabolism, notably in starch degradation; Belongs to the family 97 of glycoside hydrolases (GH97); Lipoprotein signal peptide cleaved between the residues 20 and 21; Localized in the cytoplasmic or outer membrane or both; High confidence in function and specificity.
 
     0.499
susB
Alpha-glucosidase, family GH97; The Sus (starch utilization system) proteins are involved in the starch catabolism; The SusB protein is an alpha-glucosidase that hydrolyzes the alpha-1,4 linkages of maltose and maltotriose and the alpha-1,4 and alpha-1,6 linkages of the panose; It belongs to the family 97 of glycoside hydrolases; Signal peptide cleaved between the residue 24 and 25; Localized in the periplasmic space; High confidence in function and specificity.
 
     0.441
ruvA
Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
       0.429
CAZ94387.1
Alpha-glucosidase, family GH97; Alpha-glucosidases catalyse the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose. Involved in carbohydrate metabolism, notably in starch degradation; Belongs to the family 97 of glycoside hydrolases (GH97); Lipoprotein signal peptide cleaved between the residues 20 and 21; localized in the outer membrane; High confidence in function and specificity.
 
     0.419
mapA
Maltose phosphorylase, family GH65; Maltose phosphorylase catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. It belongs to the family 65 of the glycoside hydrolases. Involved in the maltose metabolism; High confidence in function and specificity.
 
  
 0.411
malS
Alpha-amylase, family GH13; Alpha-amylase catalyzes the endohydrolysis of 1,4-alpha-D-glucosidic linkages in oligosaccharides and polysaccharides. Belongs to the family 13 of the glycoside hydrolases. Involved in starch metabolism. Features an uncleaved signal peptide. Localized into the cytoplasmic membrane; High confidence in function and specificity.
 
  
 0.411
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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