STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96639.1Conserved hypothetical protein; Localized in the cytoplasm. (431 aa)    
Predicted Functional Partners:
CAZ96640.1
5'-nucleotidase; Nucleotidase that shows high phosphatase activity toward three nucleoside 5'-monophosphates, UMP, dUMP, and dTMP, and very low activity against TDP, IMP, UDP, GMP, dGMP, AMP, dAMP, and 6-phosphogluconate. Is strictly specific to substrates with 5'-phosphates and shows no activity against nucleoside 2'- or 3'-monophosphates. Might be involved in the pyrimidine nucleotide substrate cycles; Uses Divalent metal cation as cofactors. Highest activity with manganese followed by magnesium and cobalt; Belongs to the HAD-like hydrolase superfamily; Localized in the cytoplasm; Hi [...]
  
    0.823
CAZ96642.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
       0.727
CAZ96641.1
Conserved hypothetical protein; Seems to have an uncleavable N-terminal signal sequence; Putatively localized in the cytoplasmic membrane.
       0.701
CAZ94558.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
    0.694
radC
RadC plays a role in repair of DNA damage after UV and X-ray irradiation in prokaryotes; RadC may function specifically in recombinational repair that is associated with the replication fork. Involved in DNA repair; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the UPF0758 family.
       0.660
CAZ97275.1
Small protein that contain a C-terminal Smr (Small MutS Related) domain; The Smr domain would act as a nicking endonuclease and would interact with the MutS-1 protein; Belongs to the DNA mismatch repair mutS family; Localized in the cytoplasm; Function unclear.
  
    0.645
gldN
Protein putatively involved in the gliding motility; Signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; Function unclear.
  
     0.627
CAZ96643.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
     0.621
CAZ94092.1
Conserved hypothetical protein. Features a signal peptide cleaved between the residues 21 and 22. Localized in the periplasm.
  
     0.585
CAZ95377.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.584
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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