STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96642.1Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein. (476 aa)    
Predicted Functional Partners:
CAZ96641.1
Conserved hypothetical protein; Seems to have an uncleavable N-terminal signal sequence; Putatively localized in the cytoplasmic membrane.
       0.782
CAZ96639.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.727
CAZ96640.1
5'-nucleotidase; Nucleotidase that shows high phosphatase activity toward three nucleoside 5'-monophosphates, UMP, dUMP, and dTMP, and very low activity against TDP, IMP, UDP, GMP, dGMP, AMP, dAMP, and 6-phosphogluconate. Is strictly specific to substrates with 5'-phosphates and shows no activity against nucleoside 2'- or 3'-monophosphates. Might be involved in the pyrimidine nucleotide substrate cycles; Uses Divalent metal cation as cofactors. Highest activity with manganese followed by magnesium and cobalt; Belongs to the HAD-like hydrolase superfamily; Localized in the cytoplasm; Hi [...]
       0.727
CAZ95252.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.665
CAZ96956.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 15 and 16; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.635
CAZ95465.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 23 and 24; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.610
lexA
LexA repressor, family S24; LexA represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. It displays a N-terminal Helix-Turn-Helix DNA binding domain and a C-terminal serine peptidase domain of the family S24. The HTH domain binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA- binding part of lexA, leading to derepression of the SOS regulon and eventually DNA repair. The active site of the S24 domain co [...]
  
     0.582
CAZ96643.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.566
radC
RadC plays a role in repair of DNA damage after UV and X-ray irradiation in prokaryotes; RadC may function specifically in recombinational repair that is associated with the replication fork. Involved in DNA repair; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the UPF0758 family.
       0.561
CAZ94161.1
Conserved hypothetical membrane protein; Contains one transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.544
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.