STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96699.1Hypothetical protein; Contains a N-terminal transmembrane segment; Localized in the cytoplasmic membrane. (251 aa)    
Predicted Functional Partners:
CAZ96702.1
Conserved membrane lipoprotein; Lipoprotein with a signal peptide cleaved between the residues 25 and 26; Localized in the outer memebrane; Conserved hypothetical protein.
 
     0.907
CAZ96701.1
Protein that contains five repeats of twenty aminoacids The MORN (membrane occupation and recognition nexus) repeats would contribute to the cytoplasmic membrane binding, possibly by interacting with phospholipids; Putative lipoprotein signal peptide cleaved between the residues 18 and 19; possibly localized in the outer membrane; Conserved hypothetical protein.
 
     0.899
CAZ96700.1
Conserved membrane lipoprotein; Lipoprotein that consists of a SCO1/SenC domain; Signal peptide cleaved between the residues 21 and 22; Localized in the outer membrane; Family membership.
 
     0.847
CAZ98756.1
Glycoside hydrolase, family GH115; Glycoside hydrolases hydrolyse the glycosidic bond between two or more carbohydrates or between a carbohydrate and a non-carbohydrate moiety; Belongs to the family 115 of the glycoside hydrolases; Signal peptide cleaved between the residues 26 and 27; Putatively localized in the periplasmic space; Conserved hypothetical protein.
  
   0.746
CAZ94438.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding. This sequence corresponds to the N-terminal domain found in the proteins belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 25 and 26; Probably localized in the outer membrane; Family membership.
  
   0.639
CAZ95962.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space; Conserved hypothetical protein.
  
   0.595
CAZ97578.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 24 and 25; Possibly localized in the outer membrane; Family membership.
  
   0.564
CAZ97887.1
Conserved hypothetical protein; Contains an N-terminal haloacid dehalogenase (HAD) domain; Localized in the cytoplasm.
  
     0.540
CAZ95611.1
Non-peptidase protein, Family M29; This protein belongs to the family 29 of the metallopeptidases, but lacks some of the catalytic or metal-binding residues; Localized in the cytoplasm; Function unclear.
  
     0.516
CAZ97579.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (50-125) and the Plug module (141-250) acting as a channel gate; The signal peptide is cleaved between the residues 34 and 35; Family membership.
  
     0.508
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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