STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96730.1Conserved hypothetical lipoprotein; Signal peptide of lipoprotein cleaved between the residues 16 and 17; Putatively localized in the outer membrane; Conserved hypothetical protein. (182 aa)    
Predicted Functional Partners:
CAZ97830.1
Conserved hypothetical membrane protein; Contains a C-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.748
CAZ94808.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.705
CAZ95338.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.701
CAZ96728.1
Hydrolase of unknown function putatively belonging to the alpha/beta hydrolase superfamily; Localized in the cytoplasm; Function unclear.
     
 0.675
CAZ96729.1
Conserved hypothetical membrane protein; Contains five transmembrane segments; Belongs to the DUF (domain of unknown function) 161 family; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
       0.670
CAZ97269.1
Conserved hypothetical lipoprotein; Could be a lipoprotein with a signal peptide cleaved between the residues 19 and 20; Putatively localized in the outer membrane; Conserved hypothetical protein.
  
     0.663
CAZ96731.1
Possible ATPase; Belongs to the DUF (domain of unknown function) 853 family; Localized in the cytoplasm; Family membership.
       0.660
CAZ96727.1
Glyoxalase/extradiol ring-cleavage dioxygenase family; Protein that consists of a glyoxalase domain; Belongs to the Glyoxalase/bleomycin resistance protein/dioxygenase superfamily, Glyoxalase/extradiol ring-cleavage dioxygenase family; Localized in the cytoplasm; Family membership.
       0.649
CAZ95365.1
Conserved hypothetical membrane protein; Contains six transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.641
CAZ95282.1
Conserved hypothetical membrane protein; Contains eleven transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.639
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.