STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96757.1Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 28 and 29; Localized in the periplasmic space; Conserved hypothetical protein. (526 aa)    
Predicted Functional Partners:
CAZ96758.1
Conserved hypothetical protein; Localized in the cytoplasm; Belongs to the ArsC family.
 
     0.723
CAZ96975.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.684
CAZ98526.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 17 and 18; localized in the outer membrane; Conserved hypothetical protein.
  
     0.663
CAZ96756.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
     0.631
CAZ97986.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.557
CAZ97985.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.518
CAZ97975.1
Conserved protein belonging to the DUF893 family; Contains nine transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.505
CAZ95763.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.461
CAZ98367.1
Several of these transcriptional regulators are repressors of genes and operons for membrane transport and cell envelope permeability; The helix-turn-helix motif is located in the initial third of the protein. The C-terminal part contains regions that can be involved in binding of inducers, which can be drugs, and oligomerization; Localized in the cytoplasm; Family membership.
  
     0.411
CAZ96759.1
CsbD-like protein; CsbD is a bacterial general stress response protein. Its expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear. Localized in the cytoplasm; Function unclear; Belongs to the UPF0337 (CsbD) family.
       0.400
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.