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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94334.1Hypothetical protein containing an uncleaved signal peptide. Localized in the cytoplasmic membrane; Hypothetical protein. (859 aa)    
Predicted Functional Partners:
CAZ94335.1
Putative protein.
       0.639
afcA1
Alpha-L-fucosidase, family GH95; The alpha-L-fucosidase is responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha-L-fucoside; Belongs to the family 95 of the glycoside hydrolases (GH95); Features a lipoprotein signal peptide cleaved between the residues 22 and 23; Localized in the cytoplasmic or/and outer membrane; High confidence in function and specificity.
       0.498
CAZ94333.1
Hypothetical protein featuring a signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space; Hypothetical protein.
       0.494
CAZ94331.1
Kelch repeats protein; Contains a N-terminal domain of unknown function and a C-terminal domain displaying three Kelch repeats. The kelch motif forms a beta sheet and several of these sheets associate to form a beta propeller structure; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 18 and 19; Localized in the outer membrane; Family membership.
       0.430
CAZ94332.1
Hypothetical protein featuring a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Hypothetical protein.
      
0.430
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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