STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96807.1Conserved hypothetical protein; Localized in the cytoplasm. (82 aa)    
Predicted Functional Partners:
CAZ97992.1
These membrane fusion proteins (MFP) belong to a multidrug efflux pump system that confer the resistance to compounds such as antibiotics, solvents or heavy metals; Proteins of the MFP family function as 'adaptors', connecting a ABC transporters, localized in the cytoplasmic membrane, with a porin or channel localized in outer membrane; The MFP proteins seem to be anchored in the cytoplasmique membrane by a N-terminal transmembrane region; Belongs to the type I secretion system; Family membership.
  
 
 0.577
ybhG
The membrane fusion proteins (MFP) belong to a multidrug efflux pump system that confer the resistance to compounds such as antibiotics, solvents or heavy metals; Proteins of the MFP family function as 'adaptors', connecting a ABC transporters, localized in the cytoplasmic membrane, with a porin or channel localized in outer membrane; The MFP proteins seem to be anchored in the cytoplasmic membrane by a N-terminal transmembrane region; Lipoprotein with a signal peptide cleaved between the residues 19 and 20; Belongs to the type I secretion system; Specificity unclear.
  
 
 0.577
crtY
Lycopene cyclase; Catalyzes the double cyclization reaction which converts lycopene to beta-carotene; Involved in the carotenoid biosynthesis; contains a N-terminal transmembrane segment; Putatively localized in the cytoplasmic membrane; Family membership.
  
     0.545
CAZ96806.1
The alpha/beta hydrolase-fold proteins catalyse a wide range of enzymatic reactions. They are characterized by a catalytic triad, usually an serine, an aspartic acid, and an histidine; The core of enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices; Belongs to alpha/beta hydrolase superfamily; Localized in the cytoplasm; Function unclear.
       0.511
CAZ95899.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 19 and 20; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.497
CAZ96808.1
Putative protein.
       0.458
CAZ96770.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 19 and 20; Putatively localized in the outer membrane but the determination of the membrane identity for the protein localization is not clear; Family membership.
  
    0.455
alyA2
Alginate lyase, family PL7; Alginate lyase catalyzes the eliminative cleavage of polysaccharides containing beta-D-mannuronate residues to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl groups at their ends. It belongs to the family 7 of the polysaccharide lyases. Features a signal peptide cleaved between residues 32 and 33. Localized in the periplasm; High confidence in function and specificity.
  
  
 0.451
CAZ94345.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Gene very often associated with a gene encoding for a TonB-dependent receptor or transducer; Would contain a lipoprotein signal peptide cleaved between the residues 24 and 25; Probably localized in the outer membrane; Family membership.
  
    0.446
CAZ96769.1
Conserved hypothetical lipoprotein; Contains a N-terminal PKD domain present in the extracellular parts of proteins involved in interactions with other protein or polysaccharides and a C-terminal putative carbohydrate binding module (CBM); Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 28 and 29; Localized in the outer membrane; Conserved hypothetical protein.
  
 
   0.445
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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