STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96886.1Lipoprotein that contains a C-terminal Cytochrome C domain using haem iron as prosthetic group; Signal peptide cleaved between the residues 15 and 16; Belongs to the monohaem c-type cytochrome family; Localized in the cytoplasmic membrane; Family membership. (466 aa)    
Predicted Functional Partners:
ccoNO
Fusion of the subunits CcoN and CcoO of the Cytochrome cbb3 oxidase. Converts the ferrocytochrome to ferricytochrome. Belongs to the ccoNOQP operon. Contains 13 transmembrane helices; Localized in the cytoplasmic membrane; High confidence in function and specificity.
  
 
 0.985
hmoA
Molybdopterin oxidoreductase, iron-sulfur binding subunit; Ferredoxins are iron-sulphur proteins that mediate electron transfer in a range of metabolic reactions; Contains 4 4Fe-4S type ferredoxin domains and a putatif Twin-arginine translocation pathway signal; Localized in the cytoplasmic membrane; Family membership.
  
 
 0.914
CAZ96942.1
Rieske [2Fe-2S] iron-sulfur protein; Protein that contains an unknown function N-terminal domain and a C-terminal Rieske [2Fe-2S] domain; The rieske domain has a [2Fe-2S] centre. Two conserved cysteines that one Fe ion while the other Fe ion is coordinated by two conserved histidines; Prokaryotic lipoprotein signal peptide cleaved between the residues 25 and 26; Localized in the outer membrane; Function unclear.
  
 
 0.654
coxC/ctaE
Associates with subunits I, II and IV to form cytochrome c oxidase the terminal enzyme of the respiratory chain; The functional role of subunit III is not yet understood; Contains five transmembrane segmemts; Localized in the cytoplasmic membrane; High confidence in function and specificity.
  
 
 0.564
cyoC
Cytochrome O ubiquinol oxidase, subunit III; Cytochrome O terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration; Heterooctamer of two A chains, two B chains, two C chains and two D chains; Contains five transmembrane segmemts; Localized in the cytoplasmic membrane; Family membership.
  
 
 0.564
CAZ97081.1
Conserved hypothetical lipoprotein; Protein containing a bacterial Ig-like domain 1 (Big-1). Big-1 domains (~95 amino acids) are usually present in bacterial adhesion molecules of the intimin/invasin family, involved in pathogenicity. Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 25 and 26; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.554
CAZ96887.1
OmpA-like periplasmic protein; This conserved protein contains a N-terminal module adopting a galactose-binding domain-like fold and a C-terminal OmpA-like domain. OmpA-like domains are thought to be responsible for non-covalent interactions with peptidoglycan; Signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space; Family membership.
  
    0.534
CAZ95337.1
GDSL-like Lipase; Conserved protein belonging to the GDSL Lipase family, which includes a variety of lipolytic enzymes with serine as part of the active site; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Family membership.
  
     0.528
CAZ96060.1
Glycosyltransferase, family GT4; Glycosyltransferase catalyses the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Belongs to the family 4 of the glycosyltransferases. Localized in the cytoplasm; Specificity unclear.
  
     0.501
CAZ98281.1
Hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Hypothetical protein.
  
     0.456
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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