STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94349.1Belongs to the short-chain dehydrogenases/reductases (SDR) family, Glucose/ribitol dehydrogenase subfamily; Most dehydrogenases possess at least 2 domains, the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis; Localized in the cytoplasm; Family membership. (102 aa)    
Predicted Functional Partners:
CAZ94350.1
Sugar isomerase; Conserved protein belonging to the xylose isomerase family. Its exact specificity is unclear. Localized in the cytoplasm; Specificity unclear.
 
     0.903
CAZ97300.1
Carbohydrate kinase belonging to the FGGY family. Its exact specificity is unknown; Localized in the cytoplasm; Specificity unclear.
 
     0.776
CAZ94348.1
Putative protein.
       0.773
CAZ97302.1
Transcriptional regulator involved in the repression and/or the positive regulation of genes encoding for enzymes; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcriptional regulators, involved in the binding of the protein to the operator sequences in the DNA. At the C-terminus there is an effector- binding/oligomerisation domain; Localized in the cytoplasm; Family membership.
 
     0.634
CAZ94351.1
Conserved hypothetical membrane protein; Contains eleven transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.497
rhaA
Alpha-L-rhamnosidase, family GH78; Alpha-L-rhamnosidase catalyzes the hydrolysis of terminal non-reducing alpha-L-rhamnose residues in alpha-L-rhamnosides. It belongs to the family 78 of the glycoside hydrolases. Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; High confidence in function and specificity.
 
     0.483
CAZ97747.1
Transcriptional regulator involved in the repression and/or the positive regulation of genes encoding for enzymes; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcriptional regulators, involved in the binding of the protein to the operator sequences in the DNA. At the C-terminus there is an effector- binding/oligomerisation domain; Localized in the cytoplasm; Family membership.
 
     0.469
CAZ94347.1
Conserved phosphatase belonging to the Ppx/GppA family, which includes exopolyphosphate phosphatase (Ppx) and guanosine pentaphosphate phosphatase (GppA). Its exact specificity is unclear; Localized in the cytoplasm; Specificity unclear.
       0.433
CAZ96241.1
Transcriptional regulator involved in the repression and/or the positive regulation of genes encoding for enzymes; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcriptional regulators, involved in the binding of the protein to the operator sequences in the DNA. At the C-terminus there is an effector- binding/oligomerisation domain; Localized in the cytoplasm; Specificity unclear.
 
     0.408
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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