STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ96987.1Acyltransferase of unkown specificity. This family also incluses acyltransferases involved in phospholipid biosynthesis. Features a C-terminal transmembrane helix. Localized in the cytoplasmic membrane; Specificity unclear. (347 aa)    
Predicted Functional Partners:
CAZ96986.1
Sodium/solute symporter; Sodium/substrate symport is a widespread mechanism of solute transport across cytoplasmic membranes of cells. Thereby the energy stored in an inwardly directed electrochemical sodium gradient (sodium motive force, SMF) is used to drive solute accumulation against a concentration gradient; Contains nine transmembrane helices; Localized in the cytoplasmic membrane; Specificity unclear.
 
     0.922
csaA
CsaA could serves as a molecular chaperone for exported proteins or alternatively acts by stabilizing the secA protein. Belongs to a putative tRNA binding domain family. Localized in the cytoplasm; Function unclear.
       0.778
CAZ96984.1
Peroxiredoxins are thiol peroxidase. They are involved in redox regulation of the cell. Can reduce H(2)O(2) and short chain organic, fatty acid, and phospholipid hydroperoxides. The peroxidase reaction comprises two steps centered around a redox- active cysteine called the peroxidatic cysteine. It attacks the peroxide substrate and is oxidized to S-hydroxycysteine (a sulfenic acid). The second step is the regeneration of cysteine from S-hydroxycysteine. This regeneration is due to thiol-containing reductants such as thioredoxin. Localized in the cytoplasm; Family membership.
       0.540
CAZ97256.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.448
CAZ96878.1
Conserved hypothetical lipoprotein; Lipoprotein with a signal peptide cleaved between the residues 21 and 22; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.447
CAZ94457.1
Type I polyketide synthases are modular enzymes involved in the synthesis of various polyketides. This enzyme encompasses five modules: beta-ketoacyl synthase (KS), acyltransferase (AC), dehydratase (DH), enoyl reductase (ER) and acyl carrier protein (ACP). This modular enzyme is homologous to mycocerosic acid synthase (EC 2.3.1.111). Binds 1 phosphopantetheine group covalently. Localized in the cytoplasmic membrane; Specificity unclear.
  
 
 0.444
CAZ98107.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.415
CAZ97016.1
Hypothetical membrane protein; Possible permease that consists to eleven transmembrane segments; Localized in the cytoplasmic membrane; Hypothetical protein.
 
     0.401
CAZ98290.1
Hypothetical membrane protein; Protein that could belong to the akaline phosphatase superfamily; Contains five N-terminal transmembrane segments and three C-terminal TPR repeats involved in proteinprotein interactions and the assembly of multiprotein complexes; Localized in the cytoplasmic membrane; Hypothetical protein.
  
     0.400
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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