STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94360.1Conserved hypothetical protein; Localized in the cytoplasm. (603 aa)    
Predicted Functional Partners:
CAZ98092.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.717
HsdR2
Type I restriction enzyme ZgaDII, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.650
CAZ96090.1
Conserved hypothetical protein; Contains a central transmembrane helix; Localized in the cytoplasmic membrane.
  
     0.604
CAZ95711.1
This protein could be a transcriptional regulator containing an N-terminal HTH domain involved in the DNA binding; Contain a N-terminal AAA domain involved in the ATP binding; Localized in the cytoplasm; Family membership.
  
    0.557
snr1
Cytochrome c Snr1 is required for Nitrate Reduction. In the C-type cytochromes, the heme group is covalently attached by thioether bonds to two conserved cysteine residues (Cys-x-x-Cys-His). The conserved histidine residue is one of the two axial ligands of the heme iron. Cytochromes c typically function in electron transfer, but c-type cytochrome centers are also found in the active sites of many enzymes; contains a N-terminal domain of unknown function and a C-terminal cytochrome C domain; Signal peptide cleaved between the residues 24 and 25; Localized in the periplasm; High confide [...]
  
     0.552
hsdS2
The Type I restriction enzyme S subunit dictates DNA sequences specificity; Contains two DNA recognition domains, each specifying recognition of one of the two defined components of the bipartite DNA target sequence; The type I restriction enzyme, M and S subunits together form a N-6 adenine methyltransferase (MTase) that methylates the amino group at the C-6 position of a adenine residue in a hemimethylated DNA recognition sequence, in order to prevent the host from digesting its own genome via its restriction enzyme; Localized in the cytoplasm; High confidence in function and specificity.
  
  
 0.544
hsdS1
The Type I restriction enzyme S subunit dictates DNA sequences specificity; Contains two DNA recognition domains, each specifying recognition of one of the two defined components of the bipartite DNA target sequence; The type I restriction enzyme, M and S subunits together form a N-6 adenine methyltransferase (MTase) that methylates the amino group at the C-6 position of a adenine residue in a hemimethylated DNA recognition sequence, in order to prevent the host from digesting its own genome via its restriction enzyme; Localized in the cytoplasm; High confidence in function and specificity.
  
  
 0.544
CAZ94272.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 20 and 21; Putatively localized in the outer membrane; Family membership.
  
     0.540
CAZ95548.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
    0.499
CAZ97579.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (50-125) and the Plug module (141-250) acting as a channel gate; The signal peptide is cleaved between the residues 34 and 35; Family membership.
  
     0.492
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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