Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ97016.1 | CAZ97018.1 | ZOBELLIA_2869 | ZOBELLIA_2871 | Hypothetical membrane protein; Possible permease that consists to eleven transmembrane segments; Localized in the cytoplasmic membrane; Hypothetical protein. | Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21, Localized in the outer membrane; Hypothetical protein. | 0.450 |
| CAZ97016.1 | CAZ97019.1 | ZOBELLIA_2869 | ZOBELLIA_2872 | Hypothetical membrane protein; Possible permease that consists to eleven transmembrane segments; Localized in the cytoplasmic membrane; Hypothetical protein. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (23-96) and the Plug module (114-236) acting as a channel gate; The signal peptide is cleaved between the residues 20 and 21; Family membership. | 0.509 |
| CAZ97016.1 | hisC2 | ZOBELLIA_2869 | ZOBELLIA_2870 | Hypothetical membrane protein; Possible permease that consists to eleven transmembrane segments; Localized in the cytoplasmic membrane; Hypothetical protein. | The histidinol-phosphate aminotransferase catalyses the transfer of an amino group from 3-(imidazol-4-yl)-2-oxopropyl phosphate to glutamic acid to form histidinol phosphate and 2-oxoglutarate using the Pyridoxal phosphate as cofactor bound by covalent linkage to a lysine residue; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily; Possibly exported in the periplasmic space by a twin-arginine signal peptide (cleavage site between 32 and 33); High confidence in function and specificity. | 0.896 |
| CAZ97018.1 | CAZ97016.1 | ZOBELLIA_2871 | ZOBELLIA_2869 | Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21, Localized in the outer membrane; Hypothetical protein. | Hypothetical membrane protein; Possible permease that consists to eleven transmembrane segments; Localized in the cytoplasmic membrane; Hypothetical protein. | 0.450 |
| CAZ97018.1 | CAZ97019.1 | ZOBELLIA_2871 | ZOBELLIA_2872 | Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21, Localized in the outer membrane; Hypothetical protein. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (23-96) and the Plug module (114-236) acting as a channel gate; The signal peptide is cleaved between the residues 20 and 21; Family membership. | 0.659 |
| CAZ97018.1 | hisC2 | ZOBELLIA_2871 | ZOBELLIA_2870 | Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21, Localized in the outer membrane; Hypothetical protein. | The histidinol-phosphate aminotransferase catalyses the transfer of an amino group from 3-(imidazol-4-yl)-2-oxopropyl phosphate to glutamic acid to form histidinol phosphate and 2-oxoglutarate using the Pyridoxal phosphate as cofactor bound by covalent linkage to a lysine residue; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily; Possibly exported in the periplasmic space by a twin-arginine signal peptide (cleavage site between 32 and 33); High confidence in function and specificity. | 0.673 |
| CAZ97019.1 | CAZ97016.1 | ZOBELLIA_2872 | ZOBELLIA_2869 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (23-96) and the Plug module (114-236) acting as a channel gate; The signal peptide is cleaved between the residues 20 and 21; Family membership. | Hypothetical membrane protein; Possible permease that consists to eleven transmembrane segments; Localized in the cytoplasmic membrane; Hypothetical protein. | 0.509 |
| CAZ97019.1 | CAZ97018.1 | ZOBELLIA_2872 | ZOBELLIA_2871 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (23-96) and the Plug module (114-236) acting as a channel gate; The signal peptide is cleaved between the residues 20 and 21; Family membership. | Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21, Localized in the outer membrane; Hypothetical protein. | 0.659 |
| CAZ97019.1 | hisC2 | ZOBELLIA_2872 | ZOBELLIA_2870 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (23-96) and the Plug module (114-236) acting as a channel gate; The signal peptide is cleaved between the residues 20 and 21; Family membership. | The histidinol-phosphate aminotransferase catalyses the transfer of an amino group from 3-(imidazol-4-yl)-2-oxopropyl phosphate to glutamic acid to form histidinol phosphate and 2-oxoglutarate using the Pyridoxal phosphate as cofactor bound by covalent linkage to a lysine residue; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily; Possibly exported in the periplasmic space by a twin-arginine signal peptide (cleavage site between 32 and 33); High confidence in function and specificity. | 0.629 |
| hisC2 | CAZ97016.1 | ZOBELLIA_2870 | ZOBELLIA_2869 | The histidinol-phosphate aminotransferase catalyses the transfer of an amino group from 3-(imidazol-4-yl)-2-oxopropyl phosphate to glutamic acid to form histidinol phosphate and 2-oxoglutarate using the Pyridoxal phosphate as cofactor bound by covalent linkage to a lysine residue; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily; Possibly exported in the periplasmic space by a twin-arginine signal peptide (cleavage site between 32 and 33); High confidence in function and specificity. | Hypothetical membrane protein; Possible permease that consists to eleven transmembrane segments; Localized in the cytoplasmic membrane; Hypothetical protein. | 0.896 |
| hisC2 | CAZ97018.1 | ZOBELLIA_2870 | ZOBELLIA_2871 | The histidinol-phosphate aminotransferase catalyses the transfer of an amino group from 3-(imidazol-4-yl)-2-oxopropyl phosphate to glutamic acid to form histidinol phosphate and 2-oxoglutarate using the Pyridoxal phosphate as cofactor bound by covalent linkage to a lysine residue; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily; Possibly exported in the periplasmic space by a twin-arginine signal peptide (cleavage site between 32 and 33); High confidence in function and specificity. | Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21, Localized in the outer membrane; Hypothetical protein. | 0.673 |
| hisC2 | CAZ97019.1 | ZOBELLIA_2870 | ZOBELLIA_2872 | The histidinol-phosphate aminotransferase catalyses the transfer of an amino group from 3-(imidazol-4-yl)-2-oxopropyl phosphate to glutamic acid to form histidinol phosphate and 2-oxoglutarate using the Pyridoxal phosphate as cofactor bound by covalent linkage to a lysine residue; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily; Possibly exported in the periplasmic space by a twin-arginine signal peptide (cleavage site between 32 and 33); High confidence in function and specificity. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (23-96) and the Plug module (114-236) acting as a channel gate; The signal peptide is cleaved between the residues 20 and 21; Family membership. | 0.629 |