STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97036.1Conserved hypothetical protein. Localized in the cytoplasm. (360 aa)    
Predicted Functional Partners:
CAZ97035.1
Conserved hypothetical protein; Contains a B_ant_repeat domain (DUF 11) in the N-terminal region; Shows 56% of identity with the N-terminal domain of ORF 609; Signal peptide cleaved between the residues 26 and 27; Putatively localized in the outer membrane (PSORT result).
       0.514
CAZ97027.1
ABC importer, permease component; ABC (ATP-binding cassette) transporter, membrane domain; Proteins responsible for import of a variety of compounds across biological membranes; Contains six transmembrane segmemts; The proteins form homo- or hetero-oligomeric channels, allowing ATP-mediated transport; Localized in the cytoplasmic membrane; Family membership.
 
     0.474
CAZ94211.1
Conserved hypothetical protein; Probably localized in the cytoplasm.
  
     0.433
CAZ97028.1
ABC transporter, ATPase component; This protein is the nucleotide-binding domain of the ABC transporters (ABC ATPase); Responsible for coupling the energy of ATP hydrolysis to conformational changes in the permease component (ABC membrane); Localized in the cytoplasm near of the cytoplasmic membrane by association with the permease component; Family membership.
 
     0.419
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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