STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97040.1OmpA-like periplasmic protein; This protein has a modular architecture consisting of a N-terminal TPR motif, a central beta-propeller domain, encompassing three WD40 repeats, and a C-terminal OmpA domain. OmpA-like domains are thought to be responsible for non-covalent interactions with peptidoglycan. The tetratrico peptide repeat (TPR) is a structural motif, which mediates proteinprotein interactions; Signal peptide cleaved between the residues 23 and 24; localized in the periplasmic space and/or outer membrane; Family membership. (642 aa)    
Predicted Functional Partners:
CAZ97041.1
Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.946
CAZ96884.1
TPR repeat-containing protein; Protein that contains at least ten Tetratricopeptide repeat (TPR) domains involved in the proteinprotein interactions and the assembly of multiprotein complexes; Signal peptide cleavbed between the residues 21 and 22; Localized in the periplasmic space; Function unclear.
 
 
 0.903
CAZ97221.1
OmpA-like periplasmic protein; This protein has a modular architecture composed of a N-terminal TPR motif, a central beta-propeller domain, encompassing four WD40 repeats, and a C-terminal OmpA domain. OmpA-like domains are thought to be responsible for non-covalent interactions with peptidoglycan. The tetratrico peptide repeat (TPR) is a structural motif, which mediates proteinprotein interactions; Signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space and/or in the outer membrane; Family membership.
 
 
0.868
CAZ96133.1
OmpA-like outer membrane protein; This protein has a modular architecture composed of a N-terminal TPR motif, a central beta-propeller domain, encompassing three WD40 repeats, and a C-terminal OmpA domain. OmpA-like domains are thought to be responsible for non-covalent interactions with peptidoglycan. The tetratrico peptide repeat (TPR) is a structural motif, which mediates proteinprotein interactions; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the outer membrane; Function unclear.
 
 
0.867
CAZ95780.1
OmpA-like outer membrane protein; This protein has a modular architecture with a N-terminal domain of unknown function, a central beta-propeller domain, encompassing three WD40 repeats, and a C-terminal OmpA domain. OmpA-like domains are thought to be responsible for non-covalent interactions with peptidoglycan. Contains a signal peptide cleaved between the residues 18 and 19; Localized in the outer membrane; Function unclear.
 
 
0.859
CAZ97043.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.855
CAZ97042.1
Conserved hypothetical protein; Contains several Single hybrid motifs found in biotinyl/lipoyl-carrier proteins and domains, where the biotin and lipoic acid moieties act as covalently attached coenzyme in various enzymes; Signal peptide cleaved between the residues 23 and 24; Putatively localized in the cytoplasmic membrane.
 
   0.853
CAZ96289.1
TPR repeats protein; Protein containing six tetratrico peptide repeats (TPR). TPR repeats mediate proteinprotein interactions and the assembly of multiprotein complexes; Signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Function unclear.
 
 
 0.793
CAZ97786.1
Conserved hypothetical protein; Signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space.
 
     0.772
CAZ97789.1
Conserved hypothetical membrane protein; Contains an uncleavable signal peptide. Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.772
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.