STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97060.1Carbohydrate esterase, family CE10; Carbohydrate esterases catalyze the de-O or de-N-acetylation of substituted saccharides; Belongs to the family 10 of the carbohydrate esterases (CE10); Signal peptide cleaved between residues 19 and 20; Localized in the periplasmic space; Specificity unclear. (291 aa)    
Predicted Functional Partners:
CAZ98785.1
Acetylesterase that belongs to the lipase-GDSL Pfam family, which includes families 3 and 12 of the carbohydrate esterases (CE3, CE12). The conserved catalytic residues are Ser54, Asp202 and His205. Features an uncleaved signal peptide; Specificity unclear.
 
   
 0.915
CAZ97059.1
Acetylesterase, lipase-GDSL family; Converts an acetic ester to an alcohol and acetate; Belongs to the SGNH-hydrolase superfamily, lipase-GDSL family, which includes families 3 and 12 of the carbohydrate esterases (CE3 and CE12); Signal peptide cleaved between the residues 17 and 18; Localized in the periplasmic space; Specificity unclear.
 
   
 0.843
nahA2
Beta-N-acetylhexosaminidase, family GH20; Beta-N-acetylhexosaminidase catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; Belongs to the family 20 of the glycoside hydrolases (GH20); Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21; Localized in the outer membrane; High confidence in function and specificity.
   
   0.684
glpF
Glycerol enters the cell via the glycerol diffusion facilitator protein. This membrane protein facilitates the movement of glycerol across the cytoplasmic membrane. Belongs to the Major Intrinsinc Protein family which also includes aquaporin. Features six transmembrane helices. Localized in the cytoplasmic membrane; High confidence in function and specificity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.661
CAZ94457.1
Type I polyketide synthases are modular enzymes involved in the synthesis of various polyketides. This enzyme encompasses five modules: beta-ketoacyl synthase (KS), acyltransferase (AC), dehydratase (DH), enoyl reductase (ER) and acyl carrier protein (ACP). This modular enzyme is homologous to mycocerosic acid synthase (EC 2.3.1.111). Binds 1 phosphopantetheine group covalently. Localized in the cytoplasmic membrane; Specificity unclear.
  
 
 0.591
CAZ97866.1
Carbohydrate esterase, family CE1; Carbohydrate esterases catalyze the de-O or de-N-acetylation of substituted carbohydrates; Belongs to the family 1 of the carbohydrate esterases (CE1); Prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Localized in the outer membrane; Specificity unclear.
     0.477
CAZ98327.1
Conserved protein belonging to the Xylose isomerase-like TIM barrel family; Localized in the cytoplasm; Family membership.
  
     0.445
CAZ97062.1
Conserved hypothetical protein. Localized in the cytoplasm.
       0.421
fdx
Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. It binds two 4Fe-4S clusters; Localized in the cytoplasm; Function unclear.
   
   0.413
siaE1
Sialate O-acetylesterase catalyzes the removal of O-acetyl ester groups from position 9 of the parent sialic acid, N-acetylneuraminic acid; Signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; High confidence in function and specificity.
 
   
 0.405
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.