STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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[Homology]
Score
cysISulfite reductase [NADPH] hemoprotein beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (566 aa)    
Predicted Functional Partners:
cysJ
Sulfite reductase [NADPH] flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component.
 0.998
cysH
The 3'-phosphoadenosine 5'-phosphosulfate (PAPS) reductase called also PAPS sulfotransferase catalyses the reduction of activated sulfate into sulfite; The enzyme uses thioredoxin as an electron donor for the reduction of PAPS to phospho-adenosine-phosphate (PAP); Belongs to the PAPS reductase family; Localized in the cytoplasm; High confidence in function and specificity.
 
 0.990
CAZ97170.1
Oxidoreductase that contains in its C-terminal, a flavodoxin-like domain with a flavin mononucleotide (FMN)-binding site and a NAD-binding domain. In its N-terminal part there are four transmembrane segemnts; Belongs to the Flavoprotein pyridine nucleotide cytochrome reductase family; Localized in the cytoplasmic membrane; Specificity unclear.
 
 0.981
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
 0.919
sqrA
Sulfide:quinone oxidoreductase; Enzyme that uses electrons from H2S to reduce quinones with the use of NADP. S0 is oxidized to sulfite and water. This process confers resistance to heavy metals such as cadmium and cisplatin; Binds 1 FAD noncovalently as cofactors; Belongs to the Pyridine nucleotide- disulphide oxidoreductase family; Localized in the cytoplasm; High confidence in function and specificity.
  
 0.910
CAZ97567.1
Oxidoreductase that uses the FAD and NADH as coenzyme; Belongs to the pyridine nucleotide-disulphide oxidoreductase superfamily; Localized in the cytoplasm; Specificity unclear.
     
 0.904
sirA
Sulfite reductase catalyses the six-electron reduction reactions of sulfite to sulfide; Contains a Fe(4)S(4) cluster coupled to a siroheme through a cysteine bridge; Would contains a C-terminal HEPN domain of unknown function; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family; Localized in the cytoplasm; High confidence in function and specificity.
     
 
0.900
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
 0.786
CAZ94376.1
The transcriptional regulators with the Rrf2-type HTH domain control a variety of operons that encode iron-sulfur-containing proteins as well as other proteins involved in electron transport. Other rrf2-type HTH proteins are repressors of genes involved in nitrite or iron metabolism. The C-terminal part of the rrf2-type HTH domain contains 3 conserved cysteine residues that may bind an Fe-S cluster. Contains a DNA-binding, winged helix-turn-helix (wHTH) domain. Localized in the cytoplasm; Family membership.
  
    0.775
cobA2
Uroporphyrin-III C-methyltransferase; This enzyme catalyzes two sequential methylation reactions, forming precorrin-1 and precorrin-2 by methylations at C-2 and C-7 of uroporphyrinogen III respectively; It is the first enzyme specific to the cobalamin (vitamin B12) pathway and precorrin-2 is a common intermediate in the biosynthesis of corrinoids such as vitamin B12, siroheme and coenzyme F430; Belongs to the precorrin methyltransferase family; Localized in the cytoplasm; High confidence in function and specificity.
 
  
 0.745
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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