STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97256.1Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Conserved hypothetical protein. (304 aa)    
Predicted Functional Partners:
CAZ97260.1
Hypothetical protein; Probably localized in the cytoplasm.
 
     0.789
CAZ97257.1
The LacI-type transcriptional regulators are involved in the repression and/or the positive regulation of genes encoding for catabolic enzymes and are important in the coordination of operons; They contain a N-terminal lacI-type HTH domain involved in the binding of the protein to the operator sequences in the DNA and a C- terminal periplasmic binding protein domain that are the primary receptors for chemotaxis and transport of many sugar based solutes that act as inducers; Localized in the cytoplasm; Family membership.
       0.741
CAZ98087.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.741
CAZ97262.1
Conserved hypothetical lipoprotein; Contains a signal peptide of lipoprotein cleaved between the residues 15 and 16; Localized in the cytoplasmic and/or outer membrane; Conserved hypothetical protein.
 
     0.613
CAZ97261.1
NAD(P)-dependent dehydrogenase that belongs to the Rossmann fold family; Contains a twin-arginine translocation signal peptide; Localized in the periplasmic space; Specificity unclear.
 
     0.600
CAZ94178.1
Conserved hypothetical lipoprotein; Protein that contains a N-terminal domain of about 740 residues whithout any similarity then, in the C-terminal part a PKD domain and a C-type cytochrome domain are present; Lipoprotein with a signal peptide cleaved between the residues 18 and 19, Localized in the cytoplasmic or outer membrane (or both); Conserved hypothetical protein.
    
0.522
CAZ95057.1
Conserved hypothetical membrane protein; Contains an uncleavable signal peptide; localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.512
CAZ97759.1
This conserved protein contains two N-terminal type-III fibronectin domains and a C-terminal domain of unknown function; Signal peptide cleaved between the residues 33 and 34; Localized in the periplasmic space; Family membership.
  
     0.485
CAZ96368.1
Conserved hypothetical protein; Signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space.
  
     0.471
CAZ95865.1
Conserved hypothetical protein; Contains two transmembrane segments; Protein probably localized in the cytoplasmic membrane.
  
     0.459
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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