STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97260.1Hypothetical protein; Probably localized in the cytoplasm. (397 aa)    
Predicted Functional Partners:
CAZ97261.1
NAD(P)-dependent dehydrogenase that belongs to the Rossmann fold family; Contains a twin-arginine translocation signal peptide; Localized in the periplasmic space; Specificity unclear.
 
     0.917
CAZ97262.1
Conserved hypothetical lipoprotein; Contains a signal peptide of lipoprotein cleaved between the residues 15 and 16; Localized in the cytoplasmic and/or outer membrane; Conserved hypothetical protein.
 
     0.853
CAZ97256.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.789
CAZ97259.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Gene very often associated with a gene encoding for a TonB-dependent receptor or transducer; Contains a lipoprotein signal peptide cleaved between the residues 25 and 26; Putatively localized in the outer membrane; Family membership.
 
     0.779
CAZ97258.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (34-108) and the Plug module (124-231) acting as a channel gate; The signal peptide is cleaved between the residues 30 and 31; Family membership.
 
   
 0.686
CAZ97750.1
Possible FAD dependent oxidoreductase; Contains a C-terminal flavoprotein domain (206 to 593); Belongs to the FAD/NAD(P)-binding Rossmann fold Superfamily, pyridine nucleotide-disulfide oxidoreductase family; Signal peptide cleaved between the residues 19 and 20; Localized in the periplasmic space; Family membership.
  
     0.640
CAZ96474.1
Sugar phosphate isomerases/epimerases; Protein exported in the periplasmic space by the twin-arginine translocation pathway caracterised by a non-Sec signal sequences; The signal peptide is cleaved between residues 33 and 34; Family membership.
 
    0.615
gltA-2
Glutamate synthase [NADPH] large chain; Glutamate synthase is a key enzyme in the early stages of the assimilation of ammonia. It is a complex iron-sulfur flavoprotein catalyzing the reductive transfer of the amido nitrogen from L-glutamine to 2-oxoglutarate to form two molecules of L-glutamate via intramolecular channelling of ammonia from the amidotransferase domain to the FMN-binding domain. Glutamate synthase forms an aggregate of 4 catalytic active heterodimers, consisting of a large and a small subunit (GltB). GltA binds as cofactors a 3Fe-4S cluster, a FAD and a FMN. Localized i [...]
    
 
 0.593
CAZ97591.1
Possible flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases; Contains a signal peptide of lipoprotein cleaved between the residues 21 and 22; Localized in the outer membrane; Family membership.
  
     0.587
CAZ96105.1
Esterase; Putative esterase. Adopts an alpha/beta hydrolase fold; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Specificity unclear.
  
     0.586
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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