STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97272.1Conserved hypothetical membrane protein; Contains an N-terminal and a C-terminal transmembrane segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein. (103 aa)    
Predicted Functional Partners:
CAZ97274.1
Conserved hypothetical membrane protein; Contains two C-terminal transmembrane segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
       0.796
CAZ97273.1
Conserved hypothetical membrane protein; Contains an N-terminal and a C-terminal transmembrane segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
      
0.773
CAZ97275.1
Small protein that contain a C-terminal Smr (Small MutS Related) domain; The Smr domain would act as a nicking endonuclease and would interact with the MutS-1 protein; Belongs to the DNA mismatch repair mutS family; Localized in the cytoplasm; Function unclear.
       0.581
CAZ98187.1
Conserved protein belonging to the thioredoxin family. Thioredoxins are small proteins of approximately one hundred amino-acid residues which participate in various redox reactions via the reversible oxidation of an active center disulfide bond; Signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Family membership.
  
 
 0.417
dsbD
Thiol:disulfide interchange protein; DsbD, also known as protein-disulfide reductase, is required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps; Uses NAD(P) as cofactor; Contains eight transmembrane helices; Localized in the cytoplasmic membrane; High confidence in function and specificity.
  
 
 0.417
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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